Gossypium arboreum (tree cotton): 108474040
Help
Entry
108474040 CDS
T05776
Name
(RefSeq) pectinesterase-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Module
gab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108474040
Enzymes [BR:
gab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
108474040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
Rit1_C
Motif
Other DBs
NCBI-GeneID:
108474040
NCBI-ProteinID:
XP_017631407
UniProt:
A0A0B0N2I7
LinkDB
All DBs
Position
11:complement(12329793..12333017)
Genome browser
AA seq
560 aa
AA seq
DB search
MYHPSARSKTLLVLLPISALVLVLLSSVALLTNSPKATQLQHLHVHNHLQIAHSACEGTL
YPDLCVSTISVLPDLASKTLPELIQATLNQTMYEVRLSSANCTGIEKRIKSYSKREEAAI
NDCLELFDDTLEELKVALADLAPKKLAVSRNYHDLQTFLSAAMTNQYTCLDGFARSKGNV
RNIIKKGLHNITHHVSNSLVMLKKVPGVNKSKSEYFPQQGRLKNGFPSWLSRQDRILLQA
SVNETEFDLIVAKDGTGNFTTINDAVAAAPNNSNTRFVIYIKAGSYFENVEVVKKKKMLM
FVGDGIGKTVVKANRNVVDGFTTFRSATVAVVGEGFIAKGITFENSAGPSKHQAVALRSG
SDLSAFYKCSFVAYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYARKPNPN
QKNIFTAQGREDPNQNTGISILNCKIAAAADLVPVKSSFKTYLGRPWKEYSRTVIMRSYI
DDSVDPAGWLEWNGTFALSTLYYGEYLNRGPGSSTSARVTWPGYRVINSSTEATQFTIEP
FIQGNEWLNSSNIPFALGLN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatcctagtgcaagatccaagaccttgcttgttcttttacccatttcagcactt
gtcttggtcttgctttcgtccgtagctcttctaacaaacagccccaaagccacacaactc
cagcatttacacgtccacaatcacctccaaattgctcactcagcatgtgaagggacctta
taccccgacctttgcgtctccaccatctctgttctcccagatctcgcttccaaaacactg
ccagagctcatccaagcaactctaaaccaaacaatgtacgaggtccgtctctcctctgcc
aactgcaccggcattgaaaagcggatcaaaagttacagcaaacgggaagaggcagcgata
aacgattgccttgagctttttgatgacaccctggaggagctgaaagttgcacttgctgat
ctcgccccaaagaaattagcagtctccaggaactaccacgacttgcagacatttctaagc
gccgcgatgaccaaccagtatacgtgtcttgatgggttcgcacgtagcaaaggaaatgtt
aggaacattatcaaaaagggtcttcacaacatcactcatcacgtgagcaactctctcgta
atgctcaaaaaagtccccggtgtcaacaaatccaaatccgagtattttcctcaacaggga
cgcttgaaaaacgggttcccttcgtggttatcccgccaagatagaatacttctacaggct
tcagttaatgaaaccgagttcgacctcatagttgccaaggatggcactgggaacttcact
accatcaacgacgctgttgccgctgctccaaataatagtaacacaaggtttgtgatatat
ataaaagcagggtcttattttgaaaatgtagaggtggtaaagaagaagaaaatgctgatg
tttgtgggagatgggatcggtaagacagtggtgaaggccaacagaaatgtcgttgatggc
tttactactttccgttctgccaccgtcgctgtggtgggggagggattcatagcgaaaggg
ataaccttcgagaactcggcggggccgagcaaacaccaagcagtggctttaaggagtggg
tcagacctctctgcattctacaaatgcagcttcgttgcttaccaagacactctctacgtc
cattcccttaggcaattctatcgggaatgtgacatatacgggacagtggacttcatattc
ggaaacgcagctgttgttttccaggactgcaatttatatgctcgtaaacccaatccaaac
cagaagaacattttcaccgctcaaggaagagaagaccctaaccagaacactgggatttca
attctcaactgcaagatcgctgcagctgcggatttagtccccgtaaaatcatcgttcaag
acgtatttggggcgtccttggaaagagtattccaggacagttattatgcgttcgtacatt
gatgattcagtggatcctgccggatggttagaatggaatgggacgtttgctttgagtacc
ctctattatggggagtacctgaaccgagggcccgggtccagtacgagtgcaagagtaact
tggcctggttatagggtcatcaacagttccactgaggcaactcagtttacaattgagcca
tttatacaaggaaatgagtggctaaattctagcaatattccattcgctctcggcttgaat
tga
DBGET
integrated database retrieval system