KEGG   Gossypium arboreum (tree cotton): 108474118
Entry
108474118         CDS       T05776                                 
Name
(RefSeq) RRP12-like protein isoform X1
  KO
K14794  ribosomal RNA-processing protein 12
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gab03009]
    108474118
Ribosome biogenesis [BR:gab03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    108474118
  Pre-60S particles
   Other pre-60S particles
    108474118
SSDB
Motif
Pfam: RRP12_HEAT RIX1
Other DBs
NCBI-GeneID: 108474118
NCBI-ProteinID: XP_017631515
LinkDB
Position
4:complement(80594100..80604284)
AA seq 1179 aa
MKKKQIPNSPLDDKETPKEIDNENEIPLEDGSDICQQLMDRYSKSSAPQHRHLMATAAAM
RSILSSESLPLSPPAYFAASISALDDDSAATLDSTAIGALLTFLSLVVPAVPKGGIASGK
AKEAVEVVVRVLGKEGLGVASLRSGVKCLGLLLVGFSDLQDWHSVQFGLESLLGFAIDKR
PKVRRCAQEYLEKFFKSSQSSDVMKEASKLVLSLLKSHMPVALTLNTIKSADDSKDETLS
NPEHLEVLHMLNVLKLTVPYLSATIRLKILSELCKLTSSEFSILTRNIHKTIEVFFGNSN
AEAIIPATENIIVSLSSYVSGEKNPVDTLISAATLLKCAVDKLYAVDSNSWTKHTPFVYD
SLAALLSSEASVASHASDIMKELITDHIDLKSLSSDNNGLGSEEADALKSICSIFENTLS
SSDGIPNEHVLAVLTVLFQKLGESSYIFMKGIVHKLADLMTRISGNTSNTNHLQNCVGSA
VTVIGPERILTLLPITLSVDNFMHSNMWLVSILKDYVVGASLSYYMEHIVPLAKSFQEAS
CKVKKSVIRQDLQAHSHSLWGLLPAFCRYSIDTHKRFKALAELLIDILKEDSLMHENIAV
AIQILVNQNKNILRSGEDADESNNTVMGDSKLELRIPDTYSKKTATKNIKALSSCAPEIL
QALTDVFIHSIPAKRLYLKDAIGCLASITDSSITKRIFVLLVEKLQSIDGEGEFVKQADN
ADEVVEKEKNTNTMGKDASRCIIMELASSLISGAEEDLIDFIYVLIKQTFQETNEIGHHE
AYYALSRILEEHAWFCSSKSEELIDLLLGLKSPADTPSLRNRLDCFNTLMVHTLKVSSLE
ENTKPFLILNEIIVTLKDGKEETRKTTYDILLKMSSTLRKSSDLESDPPYHKLISMIMGY
LSGSSPHIKSGAVAALSVLVYDDPEICISVPDLVSSILSLLQTKAVEVIKAVLGFVKVLV
STLQAKDLQNFLSDIINGVLQWSSISRNHFRSKVTIILEILTRKCGIAAVQSVAPEKHKG
FLNTVIENRRGKTTSEETDVNDADKVPVGSSTEGSRKRRDKGFGAFKSKNDMIEHRKRKR
DKRDGGSKHAKSSEHVGHGGGMKMAKRAKHLGNSMKDHSEGNGKKKNFDKGSSTGRGQKR
KINQATTSQKGEAAGDKRHSFKVQTRPKKFRGVNKKGDK
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgaagaaaaaacaaatcccaaattccccgttagacgataaagaaaccccgaaggaaatc
gacaacgaaaacgaaatccctttggaagatgggtccgatatctgtcagcaactcatggat
cgttattcaaaatcatcagccccgcagcatcgccacctaatggccactgctgccgccatg
cgttccatcctttcatctgagtcgcttcctttatctccgccggcttactttgctgcctcc
atttctgccctcgatgatgattcagcagccacccttgattcgacggctatcggtgcgctt
ctgacgttcttgtcgcttgtggttccggcggtgccgaaaggagggattgccagtgggaag
gcaaaggaggcggtggaagttgtggtgagagtattggggaaggagggattgggagttgcg
agtttgagaagtggggtgaagtgtttggggttgttgcttgtcggattttctgatttgcag
gattggcactcggttcagtttggtctagagtcattgcttggattcgccattgataaacga
cccaaggttcggagatgtgctcaagaatatcttgagaagttttttaagtcttcacagtcc
tcagatgttatgaaggaggcaagtaaattggtactttccttgctaaaaagccatatgcct
gttgcacttaccttaaacaccataaaaagtgcagatgattctaaggatgaaacattatcg
aatcctgaacatttggaggtccttcatatgttaaatgtgctgaagcttactgttccatat
ctctctgccacaatccgtttgaaaattttatcagaactatgtaaacttactagttctgag
ttctctattcttacacggaacattcataaaaccattgaagtattttttgggaactcaaat
gctgaagcgattataccagcgacggagaacattatagtttctctttcttcttatgtctct
ggggagaagaatcctgttgacactctcatatctgccgcaactttgttaaaatgtgctgta
gataaactttatgctgtagactcaaactcctggacgaagcacactccttttgtttatgat
tcattagcagctcttttgtcttctgaggctagcgtggcatcacatgcatcagatattatg
aaggagttgattaccgaccatatagatctgaagtctctttcatctgataacaatggcctt
ggtagtgaggaagcagatgcattaaaatctatatgttcaatctttgagaataccctaagt
tcaagtgatggaattccaaacgagcatgttttggctgtcttgactgttttgtttcagaaa
ctcggagaatcctcatatatatttatgaagggcattgtacataaacttgctgacttaatg
actcgcattagtgggaacacatctaacacaaaccatcttcagaattgtgtaggatcagca
gttactgttatcgggccagagaggattctgactcttttgcctataaccctttctgttgat
aacttcatgcattcaaacatgtggttggtatccatattgaaagactatgtcgttggagca
tctcttagctattatatggagcatatagtgccacttgcaaaatcctttcaggaagcaagt
tgtaaagtaaaaaagtctgtaattcgtcaagatctgcaggctcacagtcatagcctctgg
ggattactacctgccttttgtcgttattctattgatacacacaagaggtttaaagctttg
gctgaacttttaattgatattcttaaggaggactcgcttatgcatgaaaatattgctgtt
gccatacagattcttgtcaaccaaaacaaaaatatacttagatctggagaggatgctgat
gaatcaaacaatactgtaatgggagactctaaattagagctcagaattccagacacttat
tcaaagaaaactgcaaccaaaaatatcaaggcattatcatcatgtgctccggagattctt
caggctctaactgatgtatttattcattccattccagcaaagcgtttatatcttaaggat
gccattggatgcttggcttcaataacagactcttctattaccaaaaggatttttgtgtta
ttggttgagaagctgcagtccattgatggtgaaggtgaatttgtaaagcaagctgataat
gcagatgaggtggtggaaaaagaaaaaaacactaatactatgggtaaagatgcaagcagg
tgtatcataatggagctggcatcttctcttatttcaggggcagaggaggaccttattgat
tttatctatgtcttaataaagcaaactttccaggaaacaaatgagatcggtcatcatgaa
gcatattatgctttaagcagaattttggaggagcatgcttggttttgttcttctaaatcg
gaggagttgattgatctattacttggcctaaaatctccagctgatactccatctcttaga
aaccggcttgattgcttcaacacactaatggttcataccttgaaggtgagctcattggag
gaaaatacgaagccattccttattcttaatgagattatagtcacattgaaggatggaaag
gaagaaacaaggaaaacaacttacgatatattactaaagatgagttctaccttaagaaag
tcgtcagatctcgaatctgatccaccctatcacaaactgattagcatgataatgggatat
ctttctggttcatcacctcacattaagagtggagcagtggctgccctgtctgttctcgtg
tatgatgatcctgagatatgtatctcagtgcctgatcttgtttcttctattttatccttg
ttgcaaaccaaagctgtggaagttataaaagctgttttgggttttgtaaaagtcttggtt
tccaccttgcaagctaaagacctgcagaattttctttccgatattatcaatggagttcta
cagtggtcatctatctcgagaaatcatttcagatcaaaggtcactataatactggaaatt
ttgacaagaaagtgtggtattgctgctgttcaatctgttgctccggaaaagcacaagggt
tttctgaataccgttatagagaaccgacgtggcaaaacgacttctgaagaaactgatgtc
aatgatgcagacaaagtacccgtgggttcatcaaccgaagggtctcgaaagaggagagat
aagggattcggtgcttttaaaagtaaaaacgacatgatcgaacaccgaaagagaaaaagg
gacaaaagggatggtggcagcaagcacgccaaatcaagtgaacatgttggccatggtggt
ggaatgaaaatggctaaaagagctaagcacttaggaaattcaatgaaggatcattcagaa
ggaaatggtaaaaagaagaatttcgacaaagggtccagcaccggcagaggtcagaagaga
aagataaatcaggcaactacgagccaaaagggtgaggcagctggtgataaacgacattct
ttcaaggtacaaactcgacccaagaaatttagaggggtaaataagaaaggtgacaagtaa

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