Gossypium arboreum (tree cotton): 108474118
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Entry
108474118 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108474118
KO
K14794
ribosomal RNA-processing protein 12
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108474118
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
90S particles
Other 90S particles
108474118
Pre-60S particles
Other pre-60S particles
108474118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_Maestro
RIX1
Motif
Other DBs
NCBI-GeneID:
108474118
NCBI-ProteinID:
XP_017631515
LinkDB
All DBs
Position
11:135966361..135976463
Genome browser
AA seq
1179 aa
AA seq
DB search
MKKKQIPNSPLDDKETPKEIDNENEIPLEDGSDICQQLMDRYSKSSAPQHRHLMATAAAM
RSILSSESLPLSPPAYFAASISALDDDSAATLDSTAIGALLTFLSLVVPAVPKGGIASGK
AKEAVEVVVRVLGKEGLGVASLRSGVKCLGLLLVGFSDLQDWHSVQFGLESLLGFAIDKR
PKVRRCAQEYLEKFFKSSQSSDVMKEASKLVLSLLKSHMPVALTLNTIKSADDSKDETLS
NPEHLEVLHMLNVLKLTVPYLSATIRLKILSELCKLTSSEFSILTRNIHKTIEVFFGNSN
AEAIIPATENIIVSLSSYVSGEKNPVDTLISAATLLKCAVDKLYAVDSNSWTKHTPFVYD
SLAALLSSEASVASHASDIMKELITDHIDLKSLSSDNNGLGSEEADALKSICSIFENTLS
SSDGIPNEHVLAVLTVLFQKLGESSYIFMKGIVHKLADLMTRISGNTSNTNHLQNCVGSA
VTVIGPERILTLLPITLSVDNFMHSNMWLVSILKDYVVGASLSYYMEHIVPLAKSFQEAS
CKVKKSVIRQDLQAHSHSLWGLLPAFCRYSIDTHKRFKALAELLIDILKEDSLMHENIAV
AIQILVNQNKNILRSGEDADESNNTVMGDSKLELRIPDTYSKKTATKNIKALSSCAPEIL
QALTDVFIHSIPAKRLYLKDAIGCLASITDSSITKRIFVLLVEKLQSIDGEGEFVKQADN
ADEVVEKEKNTNTMGKDASRCIIMELASSLISGAEEDLIDFIYVLIKQTFQETNEIGHHE
AYYALSRILEEHAWFCSSKSEELIDLLLGLKSPADTPSLRNRLDCFNTLMVHTLKVSSLE
ENTKPFLILNEIIVTLKDGKEETRKTTYDILLKMSSTLRKSSDLESDPPYHKLISMIMGY
LSGSSPHIKSGAVAALSVLVYDDPEICISVPDLVSSILSLLQTKAVEVIKAVLGFVKVLV
STLQAKDLQNFLSDIINGVLQWSSISRNHFRSKVTIILEILTRKCGIAAVQSVAPEKHKG
FLNTVIENRRGKTTSEETDVNDADKVPVGSSTEGSRKRRDKGFGAFKSKNDMIEHRKRKR
DKRDGGSKHAKSSEHVGHGGGMKMAKRAKHLGNSMKDHSEGNGKKKNFDKGSSTGRGQKR
KINQATTSQKGEAAGDKRHSFKVQTRPKKFRGVNKKGDK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaacaaatcccaaattccccgttagacgataaagaaaccccgaaggaaatc
gacaacgaaaacgaaatccctttggaagatgggtccgatatctgtcagcaactcatggat
cgttattcaaaatcatcagccccgcagcatcgccacctaatggccactgctgccgccatg
cgttccatcctttcatctgagtcgcttcctttatctccgccggcttactttgctgcctcc
atttctgccctcgatgatgattcagcagccacccttgattcgacggctatcggtgcgctt
ctgacgttcttgtcgcttgtggttccggcggtgccgaaaggagggattgccagtgggaag
gcaaaggaggcggtggaagttgtggtgagagtattggggaaggagggattgggagttgcg
agtttgagaagtggggtgaagtgtttggggttgttgcttgtcggattttctgatttgcag
gattggcactcggttcagtttggtctagagtcattgcttggattcgccattgataaacga
cccaaggttcggagatgtgctcaagaatatcttgagaagttttttaagtcttcacagtcc
tcagatgttatgaaggaggcaagtaaattggtactttccttgctaaaaagccatatgcct
gttgcacttaccttaaacaccataaaaagtgcagatgattctaaggatgaaacattatcg
aatcctgaacatttggaggtccttcatatgttaaatgtgctgaagcttactgttccatat
ctctctgccacaatccgtttgaaaattttatcagaactatgtaaacttactagttctgag
ttctctattcttacacggaacattcataaaaccattgaagtattttttgggaactcaaat
gctgaagcgattataccagcgacggagaacattatagtttctctttcttcttatgtctct
ggggagaagaatcctgttgacactctcatatctgccgcaactttgttaaaatgtgctgta
gataaactttatgctgtagactcaaactcctggacgaagcacactccttttgtttatgat
tcattagcagctcttttgtcttctgaggctagcgtggcatcacatgcatcagatattatg
aaggagttgattaccgaccatatagatctgaagtctctttcatctgataacaatggcctt
ggtagtgaggaagcagatgcattaaaatctatatgttcaatctttgagaataccctaagt
tcaagtgatggaattccaaacgagcatgttttggctgtcttgactgttttgtttcagaaa
ctcggagaatcctcatatatatttatgaagggcattgtacataaacttgctgacttaatg
actcgcattagtgggaacacatctaacacaaaccatcttcagaattgtgtaggatcagca
gttactgttatcgggccagagaggattctgactcttttgcctataaccctttctgttgat
aacttcatgcattcaaacatgtggttggtatccatattgaaagactatgtcgttggagca
tctcttagctattatatggagcatatagtgccacttgcaaaatcctttcaggaagcaagt
tgtaaagtaaaaaagtctgtaattcgtcaagatctgcaggctcacagtcatagcctctgg
ggattactacctgccttttgtcgttattctattgatacacacaagaggtttaaagctttg
gctgaacttttaattgatattcttaaggaggactcgcttatgcatgaaaatattgctgtt
gccatacagattcttgtcaaccaaaacaaaaatatacttagatctggagaggatgctgat
gaatcaaacaatactgtaatgggagactctaaattagagctcagaattccagacacttat
tcaaagaaaactgcaaccaaaaatatcaaggcattatcatcatgtgctccggagattctt
caggctctaactgatgtatttattcattccattccagcaaagcgtttatatcttaaggat
gccattggatgcttggcttcaataacagactcttctattaccaaaaggatttttgtgtta
ttggttgagaagctgcagtccattgatggtgaaggtgaatttgtaaagcaagctgataat
gcagatgaggtggtggaaaaagaaaaaaacactaatactatgggtaaagatgcaagcagg
tgtatcataatggagctggcatcttctcttatttcaggggcagaggaggaccttattgat
tttatctatgtcttaataaagcaaactttccaggaaacaaatgagatcggtcatcatgaa
gcatattatgctttaagcagaattttggaggagcatgcttggttttgttcttctaaatcg
gaggagttgattgatctattacttggcctaaaatctccagctgatactccatctcttaga
aaccggcttgattgcttcaacacactaatggttcataccttgaaggtgagctcattggag
gaaaatacgaagccattccttattcttaatgagattatagtcacattgaaggatggaaag
gaagaaacaaggaaaacaacttacgatatattactaaagatgagttctaccttaagaaag
tcgtcagatctcgaatctgatccaccctatcacaaactgattagcatgataatgggatat
ctttctggttcatcacctcacattaagagtggagcagtggctgccctgtctgttctcgtg
tatgatgatcctgagatatgtatctcagtgcctgatcttgtttcttctattttatccttg
ttgcaaaccaaagctgtggaagttataaaagctgttttgggttttgtaaaagtcttggtt
tccaccttgcaagctaaagacctgcagaattttctttccgatattatcaatggagttcta
cagtggtcatctatctcgagaaatcatttcagatcaaaggtcactataatactggaaatt
ttgacaagaaagtgtggtattgctgctgttcaatctgttgctccggaaaagcacaagggt
tttctgaataccgttatagagaaccgacgtggcaaaacgacttctgaagaaactgatgtc
aatgatgcagacaaagtacccgtgggttcatcaaccgaagggtctcgaaagaggagagat
aagggattcggtgcttttaaaagtaaaaacgacatgatcgaacaccgaaagagaaaaagg
gacaaaagggatggtggcagcaagcacgccaaatcaagtgaacatgttggccatggtggt
ggaatgaaaatggctaaaagagctaagcacttaggaaattcaatgaaggatcattcagaa
ggaaatggtaaaaagaagaatttcgacaaagggtccagcaccggcagaggtcagaagaga
aagataaatcaggcaactacgagccaaaagggtgaggcagctggtgataaacgacattct
ttcaaggtacaaactcgacccaagaaatttagaggggtaaataagaaaggtgacaagtaa
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integrated database retrieval system
