Gossypium arboreum (tree cotton): 108474165
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Entry
108474165 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108474165
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108474165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108474165
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gab03037
]
108474165
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108474165
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
108474165
Chromatin remodeling factors
SRCAP complex
108474165
INO80 complex
108474165
INO80 complex (yeast)
108474165
SWR1 complex
108474165
ASTRA complex
108474165
Cilium and associated proteins [BR:
gab03037
]
Motile cilia and associated proteins
Dynein assembly factors
108474165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
RuvB_N
AAA_22
AAA_19
AAA_5
Mg_chelatase
AAA_16
AAA_25
ATPase
Zeta_toxin
TsaE
AAA_17
nSTAND3
bpMoxR
AAA_7
TiaS_TCKD
AAA_18
SLFN-g3_helicase
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
108474165
NCBI-ProteinID:
XP_052877775
LinkDB
All DBs
Position
11:complement(41779554..41781953)
Genome browser
AA seq
465 aa
AA seq
DB search
MAELKLSESRDLTRIERIGAHSHIRGLGLDSSLEPRDVSEGMVGQAQARKAAGVILQMIK
DGKIAGRAILLAGQPGTGKTAIAMGMAKSLGLETPFSMLSGSEIFSLEMSKTEALMQAFR
KSIGVRIKEETEIIEGEVVEIQIDRPAVSGAASKTGKLTLKTTDMETVYDLGAKMIEALG
KEKVQSGDVIAIDKASGKITKLGRSFSRSRDYDAMGPQTKFVQCPDGELQKRKEVVHCVT
LHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHM
LDIECFSFLNRALENEMAPILVVATNRGITSIRGTNYKSPHGIPIDLLDRLLIITTQPYS
EDEIRKILDIRCQEEDVEMSEDAKQLLTKIGHETSLRYAIHLITASALNCQKRKGMVVEV
QDITRVYSLFLDVRRSTQYLMEYQKEYMFNEASILDGGDADAMHD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgaaactctccgagagccgagacctgacccgaatcgaacgcattggggct
cattcccacatacggggcctaggcctcgactcctctctggagccccgtgacgtctcggaa
gggatggtgggccaagcacaagctcgtaaagctgccggtgtcatcctccaaatgatcaaa
gacggtaaaattgctggccgtgctatcttattagcgggccaacctggaaccggcaaaacc
gccatcgccatgggcatggcgaaatcccttggccttgaaacccctttctctatgctctct
ggcagcgaaatcttctcccttgagatgtcgaaaaccgaagctttaatgcaagcgtttcga
aagtccatcggagtaagaatcaaggaagaaactgaaataatcgaaggcgaagtcgttgaa
atccagattgaccggccggcagtttctggggcggcttcaaaaactggaaaattaacgctt
aaaacgacggacatggagaccgtttacgatttaggggcgaagatgatcgaggcattaggg
aaagagaaagtgcagagtggagatgtgatagctattgataaagcttcagggaaaataacg
aagcttggaaggtcattttcaaggtcgagggattacgatgctatgggcccgcaaacaaag
ttcgtgcaatgtccagacggagagctgcagaaaagaaaagaagtcgtccattgtgttacg
cttcatgagattgatgtcattaacagcagaacacagggatttcttgctcttttcactggg
gatactggtgaaatccgtgctgaggtgagagaacaaattgacacgaaggtggcagagtgg
agggaggaagggaaggctgaaatcgtgcctggtgttctctttatcgatgaggtgcacatg
cttgacatcgagtgcttttctttcctgaaccgtgctcttgagaatgagatggcccctata
ttagtagttgctacaaacagaggcataacttcaatccgtggcacaaattacaaatcccct
catggaattccaattgatcttcttgatagactactaatcatcactactcaaccttattcc
gaggatgaaattcgtaagattctagacatcaggtgccaagaggaagatgtagagatgtct
gaagatgcaaaacaactgttgaccaaaattgggcatgagacctccttgagatatgctatc
catctgatcacagcttctgcactgaattgccagaagcggaaggggatggttgtggaagtg
caggacatcactcgtgtttacagtctatttctggatgtaaggagatcaacgcagtacttg
atggagtaccaaaaagaatacatgttcaatgaagcatcaatccttgatggtggggatgcc
gatgccatgcacgattga
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