Gossypium arboreum (tree cotton): 108474177
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Entry
108474177 CDS
T05776
Name
(RefSeq) plant-specific TFIIB-related protein 1 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108474177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108474177
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
108474177
Prokaryotic type
Archaeal type
TFB
108474177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
zf-UBP
Motif
Other DBs
NCBI-GeneID:
108474177
NCBI-ProteinID:
XP_017631587
UniProt:
A0A0B0NFI7
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Position
11:complement(27919383..27922831)
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AA seq
528 aa
AA seq
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MKCPYCSAAQGRCATTTTGRSITECTSCGRVVEERQFQNHHLFHVRAQDTPLCLVTSDIP
APASAYQIHEDDPFEPTGFITAFATWSLEPNPLFLRSSLSFSGHLAELERILELSSSSAP
SATSSSTVVVDNLRAYMQILDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATA
ALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCT
LLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGL
TEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTIATGRSSVPRVDSIDLSSTADR
DKQQDSKPIKPNDVSEAGLQARGKDDAENNGNSSGTHAAMLNRPPHFRQPWLQFGAPGVR
TVGDKNQTTIGGDIREAQPSCPESEHKVDMPKTDTKGASSSLRPSQFSSSPASNVSTITW
PFRSPASSGPSPNMPIVHPPKLPPGFAELKGSGTQNGSKVTNPSGDSK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtccgtattgctcggcggcgcaaggtcggtgcgccaccacgacaaccggccgg
tccataacggagtgcacatcttgcggacgtgtcgtcgaagagcgccaattccaaaaccac
cacctctttcacgtgcgtgcccaagatacccctctctgcctcgtcacctccgacatccct
gctccagcttccgcttaccaaatccacgaagacgacccctttgagcccacgggatttatt
acggcctttgccacatggtccctcgaacccaacccactcttcctccgctcctctctctcc
ttttcgggccacctggcggagctcgagcggattctagaactctcttcgtcttcagcccct
tcggcaacttcgtcttcgacggttgtggtggataatttgagagcgtatatgcagattctt
gacgtggcgtcgattttggggttggattgtgatatatcggatcacgcgtttcagttgttt
agggattgttgttcggctacctgtttgaggaaccggagtgttgaggcgctggctactgct
gctcttgttcaggccattagggaagctcaagagcctcgaaccctccaggaaatctctatt
gctgccaatgtaccccagaaagagattggcaagtacatcaagatcctgggagaagcttta
caattaagtcaacctatcaatagtaattctatatcagttcatatgcccagattttgcact
ctccttcagctcaataaatccgcgcaggagctggcaactcatatcggagaagttgtgatc
aacaaatgcttttgcactcgccgaaatccgattagtatatctgcagctgctatatatctg
gcatgccaattagaagacaaacggaagacgcaggctgagatatgtaaggtgacaggtctc
acagaagtcaccctccgaaaagtctacaaggagctattagagaattgggatgatctactt
ccgtctaattatactccagctgtccctcccgagaaagcatttcctacaactacaattgcc
acaggccgatcttcagtgcctagagttgattcaattgatctgagttctacagcagaccga
gataagcagcaagactcaaagccaattaagcctaatgacgtgtcagaagccggccttcaa
gctagaggcaaagatgatgcagaaaacaatggaaattcttctggaacccatgctgctatg
ttgaaccggccaccacatttcaggcagccctggcttcagtttggggctcccggtgttagg
acggtaggagataaaaaccagactaccattggaggagacattagagaagcacaaccaagc
tgtccagagtcggaacataaagtagatatgccaaagacagataccaagggtgctagtagt
tccctaaggcccagccaattctcaagctctcctgcttcaaatgtgagtaccatcacttgg
ccatttcgttcgccagcctcatcagggccttcgccaaacatgcctattgtgcatcctcca
aagttgccaccaggttttgctgagcttaaaggatccgggactcaaaatggaagtaaagtt
accaatccgagtggagattccaaatga
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