Gossypium arboreum (tree cotton): 108474178
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Entry
108474178 CDS
T05776
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108474178
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
108474178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
AKAP28
Motif
Other DBs
NCBI-GeneID:
108474178
NCBI-ProteinID:
XP_017631589
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Position
11:21110027..21112444
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AA seq
526 aa
AA seq
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MPCRCGSHSTIRDDQTGDLVCSKCYTILDFDNYEAQIGGITGPTGTNIHIGYAGTGSLFS
YKDRKIYQAKTLIHEFALRLDITYSESDITSMIDEITDGEFGEGDWFNVLIGACSYVVMR
RDKKFFPAAEVAKAVGCDIYELGRMIARVVKFLKLSLPEISIAGLFEREFNNYMNRKNVA
EDKKEMMMKQGIFLVNCAVKWSLTTGRRPLPVVAAVMAFVAELNAVDGLKIEDVAEHVHA
VVSTCKLRYKELLAALVRVAQVLPWGKDISVKNVVKYAPFVIQYMELKSMEVPGGGGERV
EPFDMEDVISECLQKVAAYGNDENLSNGDSQYFEVRNRSDFPTLSSDNDGNNLKLSHECL
SLIYSTFSNEVDAEKLNGQSGQIHVRKRRGLEPYTCQDWWSGKSELSKKLLLKQILEKEV
GFDMMPPSFIAGCKANERRRQKIKAAKVRINKIVDPSSAGSDGSDNLNSSEVACGGKKRK
RRQASEIDWEDFVIEALLLHRVKEEDIEKGHYRALLGLYVFNSGTI
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgtaggtgcggaagtcattcgaccattcgcgacgaccagacgggcgacctcgtc
tgctccaaatgctacaccatcctcgatttcgacaactacgaagcccaaatcggcggcatc
accggtcccacaggcaccaatatccacatcggctacgcaggtaccggttctctcttctct
tacaaagacaggaaaatctaccaagccaaaaccttaatccacgaattcgccttgaggctt
gacataacttattctgaaagcgacattacttctatgatcgatgagatcaccgatggggaa
ttcggtgaaggcgattggtttaatgttctaatcggtgcttgttcttatgttgttatgagg
agagataagaagttttttcccgccgccgaggttgccaaggctgttggttgtgatatttat
gaattaggtaggatgattgctcgtgtcgttaagtttctgaaattgagtttgcctgagatt
agtatcgccggtttgtttgaaagagaattcaataattatatgaataggaaaaatgtggct
gaggataagaaagagatgatgatgaaacaagggatttttttggtcaattgtgctgtcaag
tggtctttgaccacaggaaggaggcctttgccggtggtggcagcagtgatggcgtttgtt
gccgagttgaatgcggtggatggtttgaagatcgaggacgtggcagagcatgttcatgcc
gtggtgtctacttgtaagttgaggtataaggagctcttggccgcacttgtcagggttgct
caagtgttgccatggggtaaagatatttcagtgaaaaatgtggtcaagtatgcaccattt
gttattcagtatatggagctaaagtcgatggaagtgcctggaggaggaggtgagagggtt
gagccttttgatatggaagatgtgattagtgagtgtttgcaaaaagttgctgcatatggg
aatgatgagaacctttcaaatggtgattctcaatattttgaggtaaggaatagaagtgat
tttcctacattatctagtgataatgatggaaataaccttaagctttcacatgaatgcttg
tccttgatttattcaacgttttcaaacgaggttgatgctgagaagttgaatggacaaagt
ggacagattcatgtgcgaaagaggagggggctcgagccatatacatgtcaggattggtgg
agtgggaaatcagaattaagtaaaaagcttcttctaaagcaaattttggaaaaagaagta
ggttttgatatgatgccaccgtcttttattgccggttgcaaggcaaatgagaggagaagg
caaaagattaaagccgctaaggtgcgaatcaataagatagtggatccatcctctgctggt
tcagatggtagtgacaatcttaactcttcagaagttgcttgtggtgggaagaagagaaag
agaagacaagccagtgaaattgattgggaagattttgttattgaagccctccttttgcat
cgggttaaagaagaagatatcgagaaagggcattatcgagctttgctaggtttgtatgtc
tttaactctgggacgatatga
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