Gossypium arboreum (tree cotton): 108474222
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Entry
108474222 CDS
T05776
Name
(RefSeq) 26S proteasome regulatory subunit 4 homolog B-like
KO
K03062
26S proteasome regulatory subunit T2
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108474222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gab03051
]
108474222
Proteasome [BR:
gab03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
108474222
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
DUF815
nSTAND3
AAA_5
AAA_2
AAA_16
RuvB_N
ATPase
AAA_lid_PRS2_C
TIP49
RNA_helicase
AAA_3
AAA_28
NPHP3_N
AAA_24
DUF1128
Sigma54_activat
TsaE
Mg_chelatase
AAA_7
IstB_IS21
Parvo_NS1
NB-ARC
NACHT
AAA_25
AAA_14
Motif
Other DBs
NCBI-GeneID:
108474222
NCBI-ProteinID:
XP_017631644
LinkDB
All DBs
Position
11:complement(84688005..84691852)
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AA seq
446 aa
AA seq
DB search
MGQGTPGGLNRQGLPGDRKGDGSNKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTP
LSKCKLRLLKLERIKDYFLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEE
LIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVM
KVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTL
LAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR
YDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFP
LPDIKTRRRIFQIHTLRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKV
THADFKKAKEKVMFKKKEGVPEGLYM
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaagggacaccaggcggtttgaaccggcaaggtcttcccggggaccgtaaaggc
gacggatcaaacaagaaggaaaagaagttcgagccagccgcaccccctgcgagggtgggt
cggaagcaacgaaaacaaaagggccctgaagcggctgctcgacttcccacggtaacccca
ctcagcaagtgcaagctacggctgttaaagctggagcggatcaaggattatttcctaatg
gaagaagagttcgttgccaatcaggaaaggcttaagccccaggaagagaaagccgaggaa
gaccgatctaaggtcgatgatttgagaggctccccgatgagtgtgggcaatttagaggaa
ctcatcgatgagaatcacgccattgtttcctcttcggttggccctgaatactatgtaggc
attttatcatttgttgataaagaccaacttgagcctggttgtgctatcttgatgcacaat
aaggttctttctgtagttggactcctgcaagatgaagtggatccaatggtatcggtaatg
aaggttgaaaaggctccattggagtcttatgctgatataggaggattggatgctcagata
caggagattaaagaggcagttgagctgcctcttacgcatcctgaattatatgaggatatt
ggtattaagcctccaaaaggagttattttgtatggagagcctgggactggcaagaccttg
ctggcaaaggcagtggcaaattctacatcagcaactttcttacgtgttgttggcagtgaa
ttaattcagaagtacttgggagatggtcccaagttagtaagggaactctttagagttgct
gatgatctctccccttcaattgtctttattgatgaaatagatgcagttggcaccaagagg
tatgatgcccattctggtggtgaacgtgaaattcagaggaccatgttggagttgctgaac
caactagatggatttgattcaagaggagatgtcaaagtgattcttgcaacaaatcgaatt
gaaagtcttgatccagctttacttcgccctggtcgaattgataggaagattgaatttcct
ctccctgacatcaaaaccaggaggcgcattttccagatacataccttgaggatgacattg
gctgatgatgtcaacttggaagaatttgttatgaccaaagatgagttctctggagctgat
ataaaggcaatatgtactgaagctggtctacttgctttaagggagcgccgcatgaaggtg
acacatgcagattttaaaaaggccaaggagaaggtgatgttcaagaagaaagaaggggtt
ccggagggtctttatatgtag
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