Gossypium arboreum (tree cotton): 108474239
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Entry
108474239 CDS
T05776
Name
(RefSeq) syntaxin-132-like
KO
K08486
syntaxin 1B/2/3
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108474239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108474239
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108474239
Membrane trafficking [BR:
gab04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108474239
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108474239
Exosomal proteins of other body fluids (saliva and urine)
108474239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
BatA
UPF0093
PigL_N
NOG1_N
Motif
Other DBs
NCBI-GeneID:
108474239
NCBI-ProteinID:
XP_017631669
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All DBs
Position
11:complement(99455773..99460503)
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AA seq
309 aa
AA seq
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MNNLLTESCEFPRGGSQGRDVELGAPMNSGELCLQEFFVKVQEIDKQYEKLDKLLKMLQD
AHEESRAVAKAPDMKSIKQRMEKDIDEVLRVARFIKGKIDELDKDNLANRQKRGCGKGSG
VDRSRVATTLAVKKKLKDKMAEFQILKERIQQEYREVIERRVFTVTGTRPDEETIDRLID
TGDSEQIFQKAIQQQGRGQVMSTVSEIQERHDAVKDMEKKLLDLQQVFLDMAVLVNAQGD
MLDDIETQVSNAVDHVQSGHKVLVKAREKQKSNRKWRCIAVILVLIIFVIIALAVLKPWN
SKKEKEKAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccttttaacggagtcctgtgaattccctagaggtggatcccaaggtagagat
gtcgagttaggagctccaatgaactctggagaactctgccttcaagaattctttgtaaag
gttcaggagatagataaacaatatgagaagctggataagctactcaaaatgcttcaggat
gcacatgaggaatcaagggcagtagctaaggctcctgacatgaaatctatcaaacagcga
atggagaaagacattgatgaagttttaagagttgctcgatttataaaggggaaaattgat
gaactggataaagataatttagccaataggcagaagcgtggatgcggaaagggatcaggt
gttgaccggtcaagggttgcaacaactcttgccgtgaaaaagaagttgaaagacaaaatg
gctgagtttcagattcttaaggagagaatccagcaagagtaccgagaggttattgagcga
cgtgttttcacagtgacaggcacaaggccagatgaagagacaattgacagattgatagat
actggagatagcgaacaaatattccagaaagcaattcagcagcaagggcgaggccaggtc
atgagcactgtgtccgaaattcaagagcgccatgatgcagtaaaagatatggagaaaaag
cttcttgatttacagcaggtatttttggatatggcggttctggttaacgcacaaggagac
atgctagatgacatagaaacgcaggtctcgaatgcagttgatcacgtgcagtcggggcat
aaggtgttggtaaaggcgagggagaaacagaagagcaacaggaagtggaggtgcattgca
gttatactcgttctcataatttttgtaattattgcacttgctgtgctcaagccctggaac
agcaaaaaagaaaaagaaaaagctgcttag
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integrated database retrieval system