Gossypium arboreum (tree cotton): 108474253
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Entry
108474253 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108474253
KO
K14006
protein transport protein SEC23
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108474253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108474253
Membrane trafficking [BR:
gab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108474253
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
SPD3_N
Glyco_hydro_67C
Zn_ribbon_10
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
108474253
NCBI-ProteinID:
XP_017631690
LinkDB
All DBs
Position
9:87145072..87148257
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AA seq
771 aa
AA seq
DB search
MDFNELEAIEGLRWPWHSWPTTKPDASSLTIPLAVMCTPLTEFSELPILPYDPLICSKCG
AVLNPYARVDYTCRVWYCSFCFSKNSFPRTYSSSLEESNLPAELFPNYSSVEYARTVNPV
TTPMGTSLSSSSLSSMASSMGGEAWGRGPAFVFVIDMCMEEEELRGVKSELLRVVEQLPE
SALVALVTFDAMVNVYDLGFSECSRVVVFHGDRELSSQQIQKFLGIGGKKLQQLGKSLVI
QKQSFLLPISECEFSITSAIEEIHSFAQVTPGHRPQRSTGVAISTALGLLEGCLVNTGAR
IMVFTSGPATRGPGIVVDSDRAIAIRNHKDLINGQAPYYWKSSNFYKRLSQRLCDSSIVL
DLFACSLDQCGAAELKVPVESSGGFMILGESFESDQFRKCMRHIFSRDEAGNLKMYFDAT
IEIVTTKDVKICGALGPCISLRKTNNLVSENEIGDGGTYIWKLGTLTSKTCIAFFFQVNY
EHKPQPGAAFLVQFITRYRDGNMGIRRRVTTAARRWVAKQSPDIRAGFDQEAATSVMARL
AIHRAETCQARDVIRWLDDNLIRFASKFGDYIQEDPSSFRLSSNFSLYPQFIFYLRRSQF
LDVFNSTPDETAFFRLMLNREGVTDSIVMIQPTLLQYSFDGPPVPVLLDIRSISPDVILL
FDSYFCVVIHYGSKIAQWRKLGYDKDPNHGNLRKLFEAPELDAGQLVAGRVPPPKLIKCD
QHSSQARFLLAKLNPSVTQDSTYTDGSDIIFTDDLSLQVFIDHLQALAVQG
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaacgaactagaagcaatcgagggcctacggtggccgtggcattcatggccc
acaacaaaacctgacgcctcctcattaacgatcccactcgccgtcatgtgcacgccgttg
acggagttctcggagctcccaatcctcccttacgaccctctcatttgttccaagtgcggc
gccgttttgaacccgtacgcgcgcgtcgattacacctgccgtgtctggtattgttctttc
tgcttctccaaaaactctttccctcgaacttactcttcttccctcgaagaatccaacctc
cccgccgaactcttccccaattacagctccgttgaatacgcgaggaccgttaatcccgtt
accacacctatggggacatcgctttcgtcgtcttcgttgtcgtcgatggcgtcatcgatg
ggcggagaagcatggggcagagggccggcgtttgtgttcgtgatcgatatgtgtatggaa
gaagaggagttgagaggggttaagagtgagttgctgcgcgtggtggaacagttgccggag
agcgcgttggttgctttggttacatttgatgcgatggtgaatgtgtatgaccttgggttt
tctgagtgttcgagggtcgtcgtgtttcatggtgatcgcgagctttcttcccagcagata
caaaagtttcttggaatcggtggtaagaagctacagcaacttgggaagagtctggttatc
caaaagcagagttttctactgcctatatctgaatgtgagttcagtataacatctgcgatc
gaggagatccattcctttgcgcaggtgacaccaggtcatcggcctcagagatcaactgga
gtggcaatatctactgcactcggacttttggaaggatgtttggttaacacaggggccagg
atcatggtcttcacttccggacctgctactcggggccctggaattgttgttgactcagat
cgtgctattgctattaggaatcataaggatctcataaatggtcaggcaccgtattattgg
aaatctagcaacttttataagagattatcgcagagactatgtgattcatccattgttctt
gatttgttcgcttgttctctggatcaatgtggagcagcggagctaaaagttcctgttgag
agttcaggtgggtttatgattttaggggagtcttttgaatccgatcaattccgaaaatgc
atgcgtcatatatttagtcgcgatgaagcagggaacttgaagatgtatttcgatgcaacc
atcgagatagtgactactaaagatgtaaaaatctgtggagccctcggaccttgcatctct
cttcggaaaacaaataatttggtgagcgagaatgagatcggggatggtggtacatatata
tggaagctgggtacacttactagtaaaacatgtattgctttcttcttccaagtaaactat
gagcataaacctcaacccggcgctgcgttcttggtacagttcataacacgctatagagat
gggaacatgggaattcgaagacgggtgacaaccgctgcaagaagatgggttgcaaagcag
tcaccagatattcgtgccgggtttgatcaggaagcagcaacttcagttatggcccgactt
gctatccatcgagcagaaacatgtcaagctagagatgttatcagatggttggacgataac
cttattcgttttgcttccaagtttggagactatatacaggaagatccttcgtcttttcgt
ctttcatcgaacttctcactttaccctcaattcatattctatttaagaaggtcccaattt
ctcgatgtctttaacagcactcccgacgagactgctttctttcgactgatgctgaatcgt
gaaggagttacagattctattgtcatgatccaacccacactcctacaatattctttcgat
ggacctccggttccggttctcttagacattcgttctatatccccggatgttattttactc
tttgactcgtacttttgcgtggttattcattatggatccaagattgctcaatggagaaag
ctcggttacgataaagacccaaatcatgggaatctaagaaagttgtttgaagcaccggag
ctggatgcaggtcagttggtggcgggacgagttccaccaccgaagcttattaaatgcgac
cagcatagcagtcaagcaaggtttcttcttgccaagttaaatccatcggttactcaagat
tcaacgtacacggatggttcagacattatatttacagatgatttgagcttacaagttttc
atagatcatttgcaagcccttgcagtgcagggctaa
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