Gossypium arboreum (tree cotton): 108474439
Help
Entry
108474439 CDS
T05776
Name
(RefSeq) callose synthase 12-like
KO
K11000
callose synthase [EC:2.4.1.-]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gab01003
]
108474439
Glycosyltransferases [BR:
gab01003
]
Polysaccharide
Structural polysaccharide
108474439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glucan_synthase
FKS1_dom1
KNOX2
Motif
Other DBs
NCBI-GeneID:
108474439
NCBI-ProteinID:
XP_017631847
LinkDB
All DBs
Position
3:135057186..135062571
Genome browser
AA seq
1639 aa
AA seq
DB search
MSLPRHRPRSQFSPPPEDEPYNIIPMHNLHIDHPGLRYPQVHVVLSSLRNVGDLRKPPFS
PWVPSMDLLDWLGLFFGFQHDNIKNQREHLVLHLANAHMRLSLPPADNNGTFQVIVVREF
RCKLLENYSNWCSYLGKASNVDSLDSDTRRELLYVGLYLLIWGESANLRFMPECICYIFH
HMAMELNKILKDYIDEDTGRPWIPSLSGENAFLNRVVKPIYDTIKAEVAKSKNGTAPHDT
WRNYDDFNEYFWSKSCFHTLNWPLDFYSKFTSERKTGFVERRTFWNVYRSFDRLWVMLFL
FLHIMVILAWEEKKFPWLALDNKDVTVRVLSLFITWSGMRLFHALLEPAMELSRVSRHTW
GLVLRMVLRILVAAAWTGTFVICYTRIWVQRYLDKHWSNEANQRIKPMISTTKQLLDSTI
AGCEGDCKAIFSVSNMFIIGLLWVPVVLIYLADTQIWYSIYSPFVGAAMGLLQLLGEIRN
IEQLRWWFRFFATAIQFNLLPQEEIKITGGSFREKLCETIHQLKVRCGLQLPLKMVELKS
NQVKANKFALIWNEIVTTFREEDMISDQEVELLQLPLNSWEIRVIRWPCFLLANELLRAL
DLATDLHDAPDNWLWYKICKNEYRRCAVIETYDCVKYLMLHKLIKSNTEEHSILKALFRE
IDHSIETEKFTKTFRTIALLQIHSKLIKLVELLLEPNESVNEIADAMQSLYAIVVPYLFK
AKTMDQLREDELAPKSRSAMARWLFKNTVESLDPSNKDFYMQVKRLHTILTSRDSMHTIP
VNNEARRRLAFFSNSLFMKMPRAPQVKKMIAFSVLTPFNDEDVLYSKETLKTKSGDGISI
LYYLQTIYDDEWKNFIERMRREGMVTADEIWTTKLRDLRLWASYRGQTFARTVRGMMYYY
RALLLLAFLDSSTETDITITKEEEGIALMKYTYVVSCQKYWEHKAIGDPRAEEIIDLLKH
NEALRMAYVDQVSTGRDEKEYYSVLIKYEQQLQREVEIYRIKLPGPMNIGEGKPENQNHG
IVFTRGDAVQTIDMNQDNYFEEALKIRNLLEEFKHHHGIHRPTILGVREHIFSGSVSSVA
WFMSAQETSFVTLFQRLFANPLKIRMHYGHPDVFDRLWFMTRGGLSKASKVINISEDIFA
GFNCILRGGSVTHHEYIQVGKGRDLGLNQISTFEAKIACGSGEQFLSRDVYRLGQRLDFF
RMLSFFHTTIGYFFNTTVIILSVYGFLWGQLYLALSGVENCILGYDNNSKKALSAVINQD
LIIQFGLFTTLPAILESYVENGFLEAIWEFLIMQLQLSTVFYTFSMGTRAHFFGRTILHG
GAKYRQTGRNFVVQHTSFAENYRLYARSHFIKAIEFGLILMVYATYTPSAKLTFFYLDMS
VTCWLLVLSWIFAPFLFNPSGFDWLKTVHDFDDFMNWIWYRGGMFAKATESWESWWYEEQ
HHLVITSLWGKLLEIILNLRFFFFQYGIVYHLGISGQSRSVFVYLWSWIFIFAAFGIYLT
MSYVRDKYGAKKHIYARLAEFLLMVLGILAIIALRRSTAFKNVDIFTSLLALVPTGWGLI
SIAQVFRPLLRHTRLWDSVVSLARYYEMMFGVIVMGPVAVLSWTPGFQSMQTRILFNDAF
SRGLQMFKIITHKVHQKDV
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgccacgtcaccggcctcgctcacagttctcaccaccgccagaagatgaaccg
tacaatattatccccatgcataatctccacatagatcatcccggcctccggtaccctcaa
gtacacgtcgtcctatcgtccttgcgcaacgtaggtgacctacgaaagccaccattctcc
ccgtgggttccttccatggacctcctcgattggttgggactattctttgggttccaacac
gataacataaagaaccaaagggaacaccttgttctccacttggctaatgctcatatgcgc
ctctctctgccaccggccgacaacaatggaaccttccaagtcatagtcgtccgcgaattc
cgctgtaagctactcgaaaactacagtaactggtgttcttacctggggaaggcatccaac
gttgacagtttagattctgatactcgtagagagttgctttacgttggactgtatttattg
atatggggagaatccgcgaatttgaggttcatgcctgaatgcatctgctacatttttcat
cacatggccatggaattgaacaaaatcctaaaagattacattgatgaagacacgggacgg
ccatggataccatcgctatcaggggaaaacgcgtttctaaatcgcgttgtaaagccaata
tatgatacgatcaaggccgaggtagcgaaaagcaaaaatggaaccgctccccatgatacg
tggaggaactatgatgatttcaacgagtacttttggagcaagagttgttttcatactctc
aactggccacttgatttctacagtaagtttacaagtgaaaggaaaaccgggtttgttgaa
cgcaggacgttttggaacgtctacagaagcttcgacaggctatgggtgatgttgtttctc
tttcttcacataatggtaatcttggcctgggaggagaagaagtttccatggctggctttg
gataacaaggatgttactgttcgagttttatcattgttcatcacttggagtggaatgagg
cttttccatgctttacttgaaccagctatggagcttagtcgtgtttcgagacatacgtgg
ggactggtccttaggatggtgctaaggattttggttgctgcagcatggactggcactttt
gtgatttgttacacaaggatttgggtgcaaaggtacctcgacaagcattggtctaatgag
gctaaccaaaggatcaagcccatgattagcacaacaaaacaattgttggattcaacaatt
gcaggctgtgagggggactgcaaagccatcttcagtgttagcaacatgttcattattgga
ttgttgtgggtgcctgtggtgttgatttacttggctgatactcagatttggtactcaatc
tattctccctttgtgggggctgccatggggttgctgcaactgttgggtgaaattcgaaac
atcgagcagctgcgatggtggtttcggttctttgccactgccattcaattcaatttgctg
ccacaagaggaaataaaaatcactggtggatctttcagggaaaaactgtgtgaaaccatt
catcagctgaaggtgagatgtgggctgcagctgcctttaaaaatggtcgaactcaaatcg
aaccaggttaaggctaacaagtttgctttaatatggaatgaaatagttaccacatttagg
gaagaagatatgatatctgatcaagaggttgagctactacagttgcctctgaattcatgg
gaaatcagggtcattcgttggccttgttttcttttggcgaatgagttgctacgtgctctt
gatctggctacggacttacatgatgcgccggataactggctctggtataaaatatgcaag
aatgagtataggcgttgtgctgtgattgaaacatatgattgtgtcaagtatttgatgctt
cataaactaatcaaaagcaataccgaggagcattccattctcaaagccttgtttcgagaa
attgatcattctatcgagaccgagaagttcactaagacatttagaacgattgcactgctt
caaatccattccaagttgataaaacttgttgagctgttgcttgaaccaaacgagagtgtg
aatgagattgctgatgctatgcagtcactttacgcaattgttgttccttaccttttcaaa
gcaaagacaatggaccagttgagggaagatgaactggctcccaagagccgatccgccatg
gcaaggtggctatttaagaacacagttgagtcgctggatcctagtaacaaggacttctat
atgcaggttaagcgcttgcatacaattcttaccagcagggactcgatgcataccattcct
gttaataacgaggcaaggcgtcgacttgctttctttagtaactcactctttatgaaaatg
cctcgagctcctcaagtgaagaagatgatagctttcagtgtccttacccctttcaacgat
gaagatgtgttgtacagcaaagaaacactcaaaactaagagcggagatgggatttccatc
ctgtattatttgcagaccatttatgatgatgagtggaagaacttcatcgaaagaatgcgt
agagagggaatggtgacagcagatgaaatatggacaaccaagttaagagatttaaggctt
tgggcatcttatagaggccagacatttgcacgcacggtcagaggcatgatgtactattat
cgagctctattgctgctagcttttctcgattcttcaacggagacggatattaccataaca
aaagaagaagaaggtattgctttgatgaagtatacatatgttgtttcatgtcagaagtat
tgggaacataaggccataggggaccctcgtgctgaagaaatcattgatcttttgaaacac
aatgaagcccttcggatggcctatgttgatcaagtttcaacagggagagatgagaaggaa
tattattcggttctcattaagtacgagcagcaattacaacgggaggtggagatatatcga
atcaagttgcctggtccaatgaacattggagaagggaaaccagagaatcaaaaccatggc
attgtcttcactcgtggtgatgcagttcaaactattgatatgaaccaagacaactatttt
gaggaagcactaaaaatccgtaacctgttggaagaattcaagcaccatcatggaatccat
agaccaactatattgggagttagagaacatattttcagtggctctgtttcgtcagttgct
tggtttatgtcagcacaggaaacgagttttgttaccttatttcaacgtctctttgcaaat
ccgctgaaaatccgaatgcattacggccatcccgatgtgttcgataggctttggttcatg
actcgtggcggccttagtaaagcctccaaagtgattaatatcagtgaggacatttttgcc
ggcttcaactgtattttgcgagggggcagtgtcacacaccatgaatacattcaagttggc
aaaggacgagacctcggattgaatcaaatatcaacctttgaagcgaagatagcttgtggg
agtggtgaacaattcctcagcagagatgtttacaggttgggtcaaagacttgattttttc
aggatgttatcattctttcacacaacaattggatatttcttcaatacaacagtgatcatc
ctttctgtctatggattcctgtggggtcaactttatctagctctcagtggtgttgaaaat
tgcattctagggtacgataacaacagcaagaaggcactgagcgctgttatcaatcaagac
ctcatcatccagtttggtctctttacaacacttccagcaatactcgagagctacgtcgag
aacggtttccttgaagccatttgggaattcttgattatgcagctccagctttcaactgtt
ttctacacattctcaatgggaacgcgtgcacatttctttggtcggaccatccttcacgga
ggtgcaaagtatcgacaaaccgggcgtaattttgtcgtacaacacacaagtttcgcagag
aattacagattgtacgcacgcagccatttcataaaggccatagagtttggattgattctc
atggtttatgcaacatacaccccatcagccaagctcacatttttttacctagacatgtca
gtcacatgttggctcctagttctctcatggatatttgctcccttcctattcaatccttcg
ggtttcgattggctaaagaccgtacacgactttgatgatttcatgaactggatttggtac
cgcggtggcatgtttgcaaaggctacagaaagctgggaaagttggtggtacgaggagcag
caccatttagtcataaccagcctatggggaaagctactggaaatcattttgaacctacgt
ttcttctttttccaatatggaattgtataccatctgggaatatcaggccaaagtaggagt
gttttcgtttacttgtggtcttggatcttcatattcgcagcattcggaatctatctaacg
atgtcgtatgttcgggacaagtacggagcaaaaaagcatatatatgctaggctggctgaa
ttccttttgatggtacttggtatacttgctattattgctctgaggcggtccacagccttc
aaaaatgttgatattttcaccagcctgttggctcttgttcctactggttggggacttata
tccatagctcaggtatttcgaccccttcttcggcataccagactgtgggactctgtggtt
tccttggctcgatactatgagatgatgtttggagtcatagtgatgggtccagtggcagtt
ttatcatggacgcctgggttccaatcaatgcaaacaaggattctatttaatgatgcattt
agcagaggcctgcaaatgttcaagattatcacacacaaagtacatcaaaaggatgtctaa
DBGET
integrated database retrieval system
