Gossypium arboreum (tree cotton): 108474458
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Entry
108474458 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108474458
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108474458
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108474458
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CWC25
Cir_N
Ribosomal_L21p
DUF3417
Motif
Other DBs
NCBI-GeneID:
108474458
NCBI-ProteinID:
XP_017631876
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All DBs
Position
3:complement(138674274..138676537)
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AA seq
412 aa
AA seq
DB search
MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEERERSEFRLLQEQAG
LVPKQERLDFLYDSGLAVGKGASSSAAGGSGGGGFKALEEALPGSKAGTDGNANQSSSAP
GALFEDKPHSANDAWRKLHSDPLLMIRQREQEALARIKNNPVQMAMIRKSVVEKKQKEKS
PDHKEHRKKHHRSSSKHRKHSSSKRHSYSEDDTSKEDKKDKNHHRKRSDYEGHYRRTESD
SEHELKETEREEKSHRRQKYGYDDQDVDKRSHDKSKRDKYSSQAPRSIDADKNQEKDRRS
YDHRDTGPRDNKRRGVSHKLSEEERAARLREMQEDAELHEEQRWKRLKKAEENDAREATL
SSTSVGKNFLDAANRSIYGAEKGGSSTIEESVRRRAHYSQGRYESEGNAFRR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaagtttctgaacaagaaaggatggcataccggtagcttgaggaacatcgaa
aacgtgtggaaagcggaacaaaagcacgaggctgagcagaagaaattggaagagcttcgt
aagcagattcatgaagagagggaacgctctgagttccgtcttctccaagaacaagctggc
cttgtcccgaagcaggagaggttggattttctctacgattctggacttgctgttgggaaa
ggtgctagtagctccgctgctggaggtagcggaggtggaggtttcaaggctctcgaagaa
gccctcccggggtcgaaggcaggtactgatggtaatgccaaccagtcgtcttctgcgccc
ggtgcgttgtttgaagacaaacctcactcggctaatgatgcctggcgtaagctccattca
gatccattgcttatgattcgccagcgcgaacaagaagcacttgctcgtatcaagaacaac
cctgtccaaatggccatgattcgcaaatctgttgtagagaagaagcaaaaggaaaaatcc
cctgatcataaggaacaccgtaagaagcatcaccgtagtagttccaagcatcggaaacat
tcatcgtcaaaacggcattcatattctgaagatgacacttctaaggaggacaaaaaagat
aaaaatcaccatcgcaagaggtcagattatgaggggcactatcgcagaacagaatcagat
tcagaacatgaattaaaggaaacagaaagggaagagaagagtcaccgcaggcagaaatat
ggatatgatgatcaagatgttgataagaggagccatgacaagtctaagcgtgataaatat
tcttctcaagctccacgaagtatagatgcagataaaaatcaagaaaaagatcgacggtct
tatgaccatagagatactggacctcgggataacaagcgccggggtgtttcccataaacta
tctgaagaggagagagctgcccggcttcgtgaaatgcaagaggatgctgagttgcatgaa
gagcaaaggtggaagcggttgaaaaaggccgaggaaaatgatgctcgggaggctacactg
tccagcacatctgttggcaaaaacttcttggatgctgccaatagaagcatttatggtgct
gagaagggtggaagctcaacaatagaagagagcgtccgtcgtagggcgcattattcacaa
ggccgttatgaatcagaaggaaatgcttttagacgttga
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