Gossypium arboreum (tree cotton): 108474464
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Entry
108474464 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108474464 isoform X1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108474464
04121 Ubiquitin system [BR:
gab04121
]
108474464
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
90S particles
Other 90S particles
108474464
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108474464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Sof1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
PROPPIN
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
eIF2A
Beta-prop_IP5PC_F
VID27
LuxS
Motif
Other DBs
NCBI-GeneID:
108474464
NCBI-ProteinID:
XP_017631883
UniProt:
A0A0B0P7R3
LinkDB
All DBs
Position
3:complement(8224916..8229877)
Genome browser
AA seq
452 aa
AA seq
DB search
MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRSQEKAVEYVRALNAAKLDKIFARPFIG
AMDGHRDSIKCMAKNPNYLKAIFSGSDDGDIRLWDLASRRTVCQFPGHQGAVQGLTVSTD
GSVLVSCGSDCTVRLWNVPDANLADSDNLSDNSAKPVAVYVWKNAFRAVDHQWDGDLFAT
AGAQVDIWNHNRSQPVNTFDWGADTTISVRFNPGEPNILATSANDRSITLYDLRMSSPAR
KVIMRTKTNSIAWNPMEPMNFTSANEDCNCYSYDARKLEEAKCVHKDHVSAVMDIDFSPT
GREFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKCSCDASYVISGSDDTNLRLWK
AKASEQLGVVLPRERKKHEYLEAVKNRYKHLPEVKRIVRHRHLPRPVYKAANLRRTMIEA
ERRKEQRRKAHSAPGSIVTEPVRKRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtaatatcacgttctacagatgagttcactcgagaacgaagccaagat
ctgcagagggtgtttcgtaatttcgaccccagcctacgatcccaagagaaagccgtcgag
tacgtccgagctcttaacgcagccaaattggacaagatatttgcaagaccctttattgga
gctatggatgggcatagagattccattaagtgtatggcaaagaacccaaattacttgaaa
gcaattttttctggttctgacgacggagatatccgactttgggatttagcttccaggcga
acagtttgtcaatttcctggtcaccaaggtgctgtacaaggtttgacagtatcaacagat
ggaagcgttcttgtatcatgtggaagtgattgcactgttaggctctggaatgttcctgat
gctaatcttgcagattcagataatctttctgataattcagctaagccggtagcagtttat
gtttggaagaatgcattccgggctgttgatcaccaatgggatggtgacctctttgccaca
gctggtgctcaagtagatatatggaatcacaataggtctcagccagtgaacacttttgat
tggggagcagacacaactatatctgttcgatttaatccaggagagccgaatatcttggca
acatcagctaatgatcggagcataacattgtatgatctgcgaatgtcatccccggcaagg
aaagttattatgaggacgaaaaccaattctattgcttggaacccaatggagcctatgaac
ttcacttcggcaaatgaggattgcaattgctacagctatgatgccagaaagctggaggag
gccaagtgtgtgcacaaagatcatgtttctgcagtaatggatattgatttctcaccaact
ggtcgggaatttgtaactggatcttatgatagaacagtcagaattttccagtataatggt
ggtcacagtcgagaaatctaccatacgaagagaatgcaaagggtattctgtgtgaagtgt
agctgtgatgccagttatgtcatttcgggaagtgatgatactaaccttaggctctggaaa
gctaaagcatcagaacaattgggagtggtacttccaagggaaagaaagaaacatgagtat
cttgaagctgttaagaatcgttacaagcatctgcctgaagttaagcgtattgtgaggcac
aggcacttgccaagaccagtttataaggcagccaaccttagacgcactatgattgaagca
gaaagaaggaaagaacaaagaaggaaagctcacagtgcccctggaagcattgtgactgaa
ccggttcgtaaaagaagaataatcaaagaggttgagtga
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