Gossypium arboreum (tree cotton): 108474487
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Entry
108474487 CDS
T05776
Name
(RefSeq) heat stress transcription factor A-5-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108474487
Transcription factors [BR:
gab03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
108474487
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GFIT
Motif
Pfam:
HSF_DNA-bind
DUF7491
DUF3450
APG6_N
TMF_TATA_bd
EzrA
COG6_N
PEP-utilisers_N
TolA_bind_tri
Csm1_N
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
108474487
NCBI-ProteinID:
XP_017631917
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All DBs
Position
3:complement(136907786..136910171)
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AA seq
496 aa
AA seq
DB search
MDPTAPSASVVGGGGGGGGGGGPAPFLIKTYDMVDDSSTDDIVSWSSNKKSFVVWNPPDF
ARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQRHLLKTIHRRKPIHS
HSNPQGSLIDHERAGYEEEIEKLSREKAALEADVLRSEQERSSLKHQVEELTQQADQMER
RQETLFNFLEKALQDPAFAEHLFRRIESMDDVAAYNKKRRLPQIDQTKPVGDHSILDNKS
CSTPEFGNVVHLDFSNKLRLELSSAVSEINLVSQSTQSSNEGEESPQRRVSQGEPKDDNI
RPQGLLFTPETLDISDTGTSFTFNMDSSFSQRVSMNESPALHSLQQRLSSSEEPDSHISC
QLNLTLASSSLQVNKSPSLTRMSQPSWEIGKVSESRSNANSKDSDSRPFHSRRNMIDGET
TLSSSKDGPNTNQEPTAAPVRVNDVFWEQFLTERPGSSDNEEASSNYRANPYEDQDDKRS
GHGLARNTKNIEQLSL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggacccaactgcaccctccgcgtcggtcgtcggcggcggcggtggtggcggcggcgga
ggagggccggcacctttccttataaaaacatacgacatggtagacgactcatcgaccgac
gacatcgtttcatggagttctaacaaaaagagctttgtggtttggaaccctcctgatttt
gctcgccttttgcttcccacttatttcaagcacaataatttctccagcttcatcaggcag
cttaatacctatgggttccggaaaattgatcccgaacgatgggaatttgccaatgaagat
tttgtgaaagatcaaaggcatcttcttaagactattcatcgaagaaaacctattcacagc
catagtaatccacagggttctttgatagatcatgaaagagctggatacgaagaagaaatt
gaaaagctttcacgtgagaaagctgcacttgaggctgatgttttgaggtctgaacaagag
cggtcatctttgaagcatcaggtggaagagctgacacaacaagctgatcaaatggagcgt
aggcaagagactttgtttaacttcttagaaaaggctttacaagaccctgctttcgccgaa
catctttttcgtagaattgaatctatggatgatgttgctgcatataataagaaaaggaga
ctgcctcaaattgatcaaaccaagccagttggtgaccatagtattttggacaacaaaagt
tgttctacacccgagtttggaaatgttgtccacctcgatttctcgaacaagcttagacta
gaattgtcatcagctgtttcggagattaacttggtttctcaaagcacgcaaagttctaat
gaaggtgaagaaagtccacagagaagggtttctcaaggagaaccaaaagatgataatatc
agaccgcaggggcttttattcacacccgaaacattagacatttcagatacaggcacatct
tttacattcaacatggattcatctttctctcaaagagtatcaatgaacgaaagcccggca
ctgcattcactgcaacagagattaagttccagtgaagaacctgatagtcatatttcctgt
caattaaatctaactctggcatcttcttcattgcaagtcaataaaagtccgagcttaact
aggatgtcccaaccaagctgggaaatcggaaaagtctccgagtcaaggtctaatgccaac
agtaaagactctgattctagacctttccatagcagaagaaacatgattgatggggaaaca
acattatcgtcatcgaaagatggccctaacacaaatcaagagcctaccgctgctccggtt
agagtaaacgatgtattctgggaacagttcctcactgagagaccaggttcctctgacaat
gaagaggccagttccaattatcgagcaaatccatacgaagatcaagatgacaaaaggtca
ggccatggactagcaaggaataccaagaacattgagcagcttagtctttag
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