Gossypium arboreum (tree cotton): 108474934
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Entry
108474934 CDS
T05776
Name
(RefSeq) crossover junction endonuclease EME1B-like isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03440
Homologous recombination
gab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108474934
03460 Fanconi anemia pathway
108474934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108474934
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108474934
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
108474934
NCBI-ProteinID:
XP_017632482
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Position
10:complement(14572299..14580899)
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AA seq
570 aa
AA seq
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MSDPIILSDGDDPKTPRPSISKKPRTVPDSHLPPVLILDDDPTPQKPSLAPPFTCGSTPS
FVAETPMSEPSVVRCSNADPSIEASDPQIGDAKLSGISRLICLESDNDSETGSKRDNDQE
NGSKCSYIDESEELEWRSRVFDYESHLGSSNLIQICEDSSSQPLYEEDDGDPQLLEENDD
PDKENFTLEQIGNTIKQNREMKADSDKKSSTNGATVKRKMTKEERTRMLEEKKLKKEQEK
LQKAALKAEAVELKKLQKERQKWEKGKFALKSIVAEIDTKVVELGSIGGHLLSRLADKGL
TYRITSNPIEKSIVWTMTVPEHISQLSPDGLEIQYVLIVSEAAEFCDLVTSDTLLDHISR
VRSKYPSYTVCYLTNRLLAYINKRENEQYKNPAIDSGWRRPLVEEVLAKLTTYYARVHSR
QCADESELAEHVVGLTCSLASCQFRKKLTRLCVSANGSLIPKDSIDKNLIKGNLWLKALL
AIPKVQPRYALAIGRKYPTMKSLLHVYMDPTKSVHDKEFLLKDLVVEGLLGNDRRLGEIC
SKRVYRVLMAQSGSVKTDDIEDGADFFTHY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatccaatcatcctatccgatggagacgacccaaagaccccccgcccttccatc
tccaagaagcccagaaccgtaccggacagtcatttacctccggttttgattctcgacgat
gaccctaccccgcaaaaaccgtcactggccccccccttcacctgcggctccactccttcc
tttgtggccgagactccgatgtcagagccttcggtcgtcaggtgctccaatgctgaccct
tcaattgaggcttcggatcctcaaattggagatgccaagctctctggaataagcagattg
atatgtttggaatctgataatgattctgaaactggttctaaaagggacaatgatcaggag
aatggatcaaagtgctcctacattgatgagtccgaagagttagaatggcgttctagagtt
tttgattatgaatctcatctagggagttctaatctaatccaaatctgtgaggacagttct
tctcagccattgtatgaagaggatgatggtgatccacaacttcttgaggaaaatgatgat
ccagacaaagaaaattttaccttagagcagatagggaacacaataaagcagaatcgagaa
atgaaagctgattctgataagaaaagtagcacaaatggagcaacggtaaaaagaaagatg
acgaaggaggagcggactcgtatgttggaagaaaagaagctaaagaaagagcaagagaaa
ttgcaaaaagctgctttgaaagctgaagctgttgagttaaaaaaattgcagaaagaaagg
cagaaatgggaaaaaggaaagtttgctctaaaatctattgtagctgaaattgatactaag
gtggttgaactagggtcaataggaggacatttactttcaaggttggctgataaaggcctt
acatatcgcataacatcaaatccaattgaaaaatcaatcgtatggaccatgacagttccc
gaacatatttcacagctttctcctgatggactagagattcagtatgtattaattgtatct
gaggctgcagagttttgtgatctagtaactagtgacacacttttggatcacatttctaga
gttcgaagtaaatatccatcgtatacagtttgctatcttacaaatagactattggcatac
atcaataaaagggaaaatgaacaatacaagaaccctgcaattgatagtggttggagacgt
ccgctggttgaggaggtgttggcaaagctgactacatattatgcaagggtacactctagg
caatgtgcagatgaatctgaactggccgaacatgttgttggtttgacatgcagtctagcc
tcgtgccaattcagaaagaagttaacgcgactctgtgtaagtgctaatggatcccttatt
cctaaggattctattgacaagaatttaataaaggggaacttgtggttaaaagctttgctc
gccatcccaaaggtccagccacgatatgctcttgccatagggagaaagtaccctaccatg
aaatcccttttgcacgtttacatggaccctactaaatcagtgcatgacaaggaatttctg
ctcaaggacttggtggtagaagggttattaggtaatgacagaagattaggtgagatttgt
tcaaagagagtctatagagtactcatggctcagagtggaagcgtcaaaactgatgatatt
gaggatggtgctgatttcttcacacattactga
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