Gossypium arboreum (tree cotton): 108475162
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Entry
108475162 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108475162
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108475162
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108475162
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-RING_2
TerY_C
Motif
Other DBs
NCBI-GeneID:
108475162
NCBI-ProteinID:
XP_052881514
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Position
3:18443844..18446951
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AA seq
502 aa
AA seq
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MVICFYLKHLNTLIELEYNKRTTFLYPSPLSFPNSWFNPQRYINRFLRRGSIGVSLICRL
YLVMGSKISKGCSRRRSRTSRSGGTDSWSPYGYPTPPQSAYPQQNYYYTPHHPSYAPSPS
YNYVPQTPGCVHRTMERKYSRIDDNYQTLDQVTAALAQAGLESSNLIVGIDFTKSNEWTG
ATSFNHRSLHHIGHGQNPYEQAISIIGQSLSAFDEDNLIPCYGFGDASTHDQDVFSFYPE
EIFCEGFEEVLARYREIVPQLRLAGPTSLAPIIEMAMTIVEQSGGQYHILLIIADGQVTR
SVDTQPGLLSPQEQNTIDAIVKASELPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQF
VNFTEITSNIMNPSRKQAEFALSALMEIPFQYKATIELGLLGRRKGDITERVPLPPPIYG
TPNPYSRASSFQQNVSPYSGYHTSATAPSLSSLDNHQVCPICLVNPKDMAIGCGHQTCCD
CGEHLQLCPICRSTIQMRIRLY
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggtaatttgtttttatctgaaacatttaaatactttaatagaattagagtacaataag
cgtacaacctttttgtatccttcaccattatcatttcccaactcttggttcaaccctcaa
aggtacattaacaggtttttgaggaggggaagcattggagtaagcttaatctgtcggtta
tatttagttatgggaagcaaaatctcaaagggttgtagcagaaggaggtctcgaactagc
aggtcaggtggtacagattcatggagtccttacggataccccacgccaccacaatctgca
tatcctcaacaaaattattactacacgccgcaccatcctagttatgcaccatcgccgtca
tataattatgtaccgcaaacgcctgggtgtgtacataggactatggagaggaaatactca
aggatagatgataactaccagacattggaccaggttactgctgctcttgcacaagctggc
cttgagtcctctaatcttattgttggtattgatttcacaaagagcaacgaatggacagga
gcgacgtcattcaaccaccgaagcttgcatcacatcggacatggtcaaaatccctacgaa
caagctatatcgattattggacagagcttatccgcttttgacgaggataacttaattccc
tgttatggatttggagatgcatcaacacatgatcaagacgtcttcagtttctatccagaa
gagatattttgtgaaggatttgaggaggtgctcgcacgatacagagaaattgttcctcaa
cttcgacttgcaggaccgacatctttggcacccatcattgaaatggcgatgactattgtt
gagcaaagtggtggtcagtaccatattttgctgataattgctgatgggcaggtgactaga
agtgttgacacacagcctggtctacttagcccccaggagcaaaacacaattgatgcaatt
gtaaaagcaagtgaactccctttgtcaattgtcctagttggggtaggtgatggaccatgg
gacatgatgagggagttcgatgataacatccctgctcgtgcctttgacaattttcagttt
gtgaacttcaccgagataacgtcgaacatcatgaatccatcaagaaagcaggcagaattt
gcactgtcagccttgatggaaataccttttcaatataaagcaacgattgagcttggctta
ttgggaagaaggaagggagatattacagagagagttcccctcccacctcccatttatggt
accccaaacccttattcacgcgcaagcagtttccagcagaatgtatctccttattctgga
tatcatacttcagccactgctccatctttaagctccctcgacaatcaccaggtttgcccc
atttgtcttgttaatcccaaggatatggccattggttgtggacaccagacttgctgtgac
tgtggagaacatctgcaactttgccccatatgtcgttcaactatccaaatgcgaatcaga
ctctattga
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