Gossypium arboreum (tree cotton): 108475281
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Entry
108475281 CDS
T05776
Name
(RefSeq) pectate lyase-like isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108475281
Enzymes [BR:
gab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108475281
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108475281
NCBI-ProteinID:
XP_052881508
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Position
3:complement(3562610..3564853)
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AA seq
454 aa
AA seq
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MEITKLRLVFLFAFFTAIPRLWANIVEFDDFWKQREEEAWKLALASYEPNPENVTNHLNY
KVNKALNKRSSNKIIEFKGVITNDTRRYLRGKHKKYTGPCMVTNPIDRCWRCRENWAENR
KRLALCGLGFGRKATGGDEGNYYLVTDNSDDDVLNPKPGTLRYAVIQNKPLWIIFAKDMH
IKLSKELIVQSNKTIDGRGANVHIAHGCGITLQFVHNVIIHNVHIHHIIESRGGLIRDSE
DHYGYRTVGDGDGISIFGSSNIWLDHISMSECQDGLIDVIQGSTAITISNCHFTHHDHVI
LLGGSDTYSNDQYMQVTIAFNHFGKELIQRMPRCRWGFFHVVNNDYTHWKMYAIGGSTHP
TIISEGNRYIAPDDPNTKEITNRNYAPESEWKNWVWRSEGDLYMNGAFFRTSGPPSPPNL
SFSEKDVIKAKPATFVRRLTRFAGTLNCKQYVKC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagataactaagctaaggcttgtttttctctttgctttttttaccgcaatcccaagg
ctatgggcaaatattgttgaatttgatgacttttggaagcaacgtgaagaagaagcttgg
aagcttgccctagcatcttatgaaccgaacccagaaaatgttactaatcacctgaactac
aaagttaacaaggctcttaataaaagaagttccaacaaaatcatagaatttaagggtgtt
attactaatgacacaagaagatacttgaggggtaaacacaagaagtacactggtccatgc
atggtgactaatccgattgataggtgttggcgatgcagggagaactgggctgagaatcgc
aaaagattggcgctatgtgggcttggttttggtcgtaaagctactggtggagatgaagga
aattactatttagtgacagataattctgatgatgatgttttaaaccctaaaccaggaact
ttacgttatgctgtgatccagaataagccattatggattatttttgctaaggatatgcac
atcaaattatcaaaggagctaattgttcaaagcaataagaccattgatggccgtggagca
aacgttcatatagcacatggatgtggaattacacttcaatttgtgcacaatgtcatcatt
cataatgttcatattcatcacattattgaaagtcgaggtggcttaattagggactctgaa
gatcactatggttatcgaacagtcggtgatggagatgggatttctatctttggatcatca
aatatttggcttgatcatatttccatgtctgagtgccaagatggacttattgatgtaata
caaggttccactgccatcaccatctcaaattgccatttcacacatcatgatcatgtgatc
ttgttaggtggaagtgacacttattctaatgatcaatacatgcaagtcacaattgcgttc
aaccattttggaaaagaattgatacaaagaatgcctagatgccgatggggattctttcat
gttgttaacaatgactacactcattggaaaatgtatgccattggtggaagcacgcatcct
actattattagtgaaggcaacaggtatattgccccagatgaccccaataccaaagagata
accaataggaactatgcaccagaatcagaatggaagaattgggtatggagatcagaagga
gacttgtacatgaatggagccttcttcagaacttctgggccaccctcacctcctaatttg
agctttagcgagaaagatgtgatcaaagccaagcctgcaacatttgttagaagactcaca
cgttttgcagggactcttaattgtaagcaatatgtcaagtgctag
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