Gossypium arboreum (tree cotton): 108475468
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Entry
108475468 CDS
T05776
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108475468
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108475468
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-H2C2_2
V-ATPase_G_2
zf-C2H2_4
zf-met
AAA_23
zf-BED
Motif
Other DBs
NCBI-GeneID:
108475468
NCBI-ProteinID:
XP_017632925
UniProt:
A0A0B0N813
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Position
3:71262763..71265694
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AA seq
431 aa
AA seq
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MLANNSCSSLPSSEPFSCLENGTTNINKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGI
KKHFRRKHSNHKQWVCDKCSKAYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD
ACHMGRVIRPESQGVQLACLSRTASSPSPSNDTHFSTAPCPWPNLALPKTKDAMFLSPTK
DHNSPKNAHSHNLELQLLTTSNPSEVSVSPKKHDNHSTHLQLSIGSSDIGDKVEYSTVTC
THKDASNKSGHHEKQAPQPLKLAMEEKTYAEEARQEAKRQIEIAEQEFAKAKRIRQQAQA
ELEKAQALKDHAIKQINSTILQITCQACQHQFQARTPPEENSLVASYISSAVTEGEIEND
IQTSLTKATNT
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgttggccaataactcttgttcctcacttccttcctcggagccattttcgtgcttagag
aatggcactactaatatcaataagaggaaaagaagacccgcaggaacaccagatccagat
gcggaagtggtttctttgtcgcctaaaacgctgctagaatcggaccgatacgtgtgtgag
atctgcaatcaaggattccagagagaccaaaacctacagatgcacaggaggcggcacaag
gttccatggaagctgctgaagagggaaacaccagtggtgaggaagcgggtcttcgtttgc
cccgagcccacttgcctacaccacgacccttgccatgctctcggcgatttggttgggata
aagaagcacttcaggaggaaacacagcaaccacaagcaatgggtctgcgataaatgttct
aaggcctacgccgttcaatctgattacaaggctcatcttaaaacctgcggcaccagaggc
cattcttgtgattgcggcagagttttttcaagagttgagagttttattgaacatcaagat
gcttgccatatggggcgtgtaatacggccagaatcacaaggggtgcagttggcttgcttg
tcacgaacagcttcaagccccagtccctccaatgatactcatttcagtacagctccttgc
ccttggcctaatttggcgttaccaaagacaaaggatgctatgttcttgagccctacaaaa
gatcataattcccctaaaaatgcgcactcccacaatttggagcttcaactcttgaccaca
tcaaatcccagtgaggtctcagtttcccccaaaaaacatgataaccattcaacccactta
caactctcaatcggctcgtctgatattggggacaaagttgaatattcaacagttacttgt
acacacaaggatgcaagcaacaaatcaggtcatcatgagaaacaagcaccccagccgtta
aaattggcaatggaggagaaaacttatgctgaagaggcaagacaggaggcgaaaaggcag
attgaaatagctgagcaagagtttgcaaaggcaaagagaatccggcaacaagcacaagct
gagttagaaaaggctcaagccttaaaggatcatgcaataaagcaaataaactccaccatc
cttcaaattacttgtcaagcttgccagcaccaatttcaagcaagaacaccacccgaagag
aactcccttgttgcgagttacatttcatcagcggtaacagaaggtgaaattgaaaacgac
attcaaacaagtcttacaaaggctactaacacataa
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