Gossypium arboreum (tree cotton): 108475909 Help Entry 108475909         CDS       T05776                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism gab  Gossypium arboreum (tree cotton) Pathway gab03013   Nucleocytoplasmic transport gab03040   Spliceosome Brite KEGG Orthology (KO) [BR:gab00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     108475909   09122 Translation    03013 Nucleocytoplasmic transport     108475909  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:gab03019]     108475909    03041 Spliceosome [BR:gab03041]     108475909 Messenger RNA biogenesis [BR:gab03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      108475909 Spliceosome [BR:gab03041]  Complex C   Other components    EJC/TREX     108475909  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     108475909 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 LIM_bind Motif Other DBs NCBI-GeneID:  108475909 NCBI-ProteinID:  XP_017633377 LinkDB All DBs Position 3:38446328..38467188 Genome browser AA seq 1844 aa AA seqDB search MSLPPIECIYVTEEIIRESKNGNSNFSFSSPVPMLRFLYELSWAMVRGELPFQKCKAVLD AVEFTERVSEDEFASCFADIVTQMAQDFTMAGECRINLIKLAKWLVESSLVPLRLFQERS EEEFLSEAEMIKIKAPDLKVKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRGSEDS TQNSSTARIGIIKSLIGHFDLDPNRVFDIVLECYELQPDNNTFLQLIPIFPKSHASQILG FKFQFYRRMEVNTPTPFGLYKLTALLVKEEFIDLDSIYAHLLPKDDEALEDYNGFSAKRL DEANKIGKINLAAIGKDLMEDEKQGDVRIDLFAALDMENEAVAERSPELEDSQTLGLLTG FLLVDDWYHAHILFDRLSPLNPVAHVRICKGLFRLIEKSISSAYDIVRQTHLQSFVSPLG IDSVDTRGTMVSNSFIDLPKELFQMLATVGPHLYRDTLLLQKVCRVLRSYYLSALELVTN ADGASNGEMVTTGHRNPRLHLKEARSRVEETLGACLLPSLQLVPANPAVGQEIWEVMNLL PYEVRYRLYGEWEKDDERNPTILAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANP MTVLRTIVHQIEAYKDMITPVVDAFKYLTQLEYDILEYVVIERLAQGGRDKLKDDGLNLS DWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQFTENL TEEQLDAMAGSETLRYQATSFGATRNNKALIKSTNRLRDSLLPKDEPKLAIPLLLLIAQH RSLVVINADAPYIKMVSEQFDRCHGTLLQYVEFLCSAVTPAAAYAQLIPSLDDLVHMYHL DPEVAFLIYRPVMRLFKCQGSHDVFWPLDANGTADITVACSESESKDDSSRVILDLGPPR KPTMWSELLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPRNVYESEIAKQHAALKA LEELPDNSSSAINKRKKDKERIQEALDRLISELHKHEENVASVRRRLTREKDRWLSSCPD TLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMI CCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFI KVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKND EREDLKVLATGVAAALAARKSSWVTDEEFGMGYLELKPVPPIASKSVAGNTVAAQNGSSV NVSQNEAAGGRAVALGTQQSDVNLVKDQVSRTKPDGRLERAENAPLGKSDLKTKGGTSAN GSDAALSVTLAASQAGTEKSHENQKQPDDSSNKLDKHAAKTPAKNSAESELKASSKRSVP VGSLTKTQKQDHGKDDGKSGKAVGRTSAISVNDRDVPSHTEGRQGGTTNVSSAITSNGKD DSSEAPDASRPSSRIVHSPKHDCSATASKSSDKVQKRTSPVEETDRLSKRRKGDVEVKDL DGEVRVSDRERSTDLRSADFDKPGTDEVTSYRTGDKPLDRSKDKGSERHDRDYRDRLERS EKSRADDILTEKSRDRSIERHGRERSVERSIDRNLDRLGDKAKDERSKDERSKVRYADTS IEKSHADDRFHGQSLPPPPPLPPHMVPQSVNATGRRDDDPDRRFGSTRHTQRLSPRHEEK ERRRSEENLLVSQDDGKRRREDDFRERKREEREGLSLKVEERERDRERDREKANVVKEDD VDATGAKRRKLKREHLPSEPGEYSPVAPPPPPLSIGMSQSYDGRERDRKGTMMQRGGYLE EPGMRIHGKEATGKMARREPDPLYDREWDDEKRQRPEQKRRHRK NT seq 5535 nt NT seq  +upstreamnt  +downstreamnt atgtctcttcctcctatagagtgtatatacgtgacagaggaaatcattcgcgagagcaaa aatggaaactctaacttctcattctcttcacctgttcccatgcttcgctttctctacgag ctctcctgggccatggtgcgcggggaattgccattccagaagtgtaaagcggtcttggat gccgtggagtttacggagagagtgtcggaggatgagtttgcctcctgctttgctgatatc gtcacgcaaatggctcaagactttacaatggccggagaatgccgcattaatttgataaaa ttggcaaagtggctggtggagtcttcattagttccattgaggcttttccaggagcggagc gaagaagagttcctatcagaggctgagatgatcaagataaaggctccagatttgaaggtt aaagaggtcagggtaaatacacgtcttctttatcagcaaacaaaatttaacctccttcga gaagagagtgagggctatgctaagctggttactctcctttgtcgaggttctgaagattca actcaaaattcatcaacagcaagaataggcatcatcaagtcattaattgggcattttgat ctggaccccaaccgtgtttttgacattgtattggagtgttatgaacttcaaccggataat aatacttttttgcaattgattcccatctttccaaagtctcatgcttcacaaattctcggt tttaagtttcaattctatcggcgcatggaagtaaatactcctaccccatttgggctctat aagcttacagcattgctagtgaaggaagagtttattgatcttgatagcatctatgctcat ttacttcccaaggatgatgaggcacttgaggattataacggtttctctgcaaaacggctt gatgaggctaacaaaattggaaaaataaatcttgctgctattggtaaggatctcatggag gatgagaaacaaggagatgtaaggatagacctttttgctgctctagatatggaaaatgag gctgttgctgaaagatctccagagcttgaggatagtcaaactttaggcttacttactggc ttccttttggtagatgattggtaccatgcccatatcctctttgatcgcctttcacctctt aatccagtggcacatgttcgaatctgcaaggggttatttaggctcattgaaaagtcaatc tcttcagcatatgatattgttcgccagacacatctccaaagctttgtgtctcccttgggt attgatagcgtggatacaagaggtacaatggttagtaactcctttattgatcttcctaag gaactctttcagatgctggctactgttggacctcatctttaccgtgatacactactgttg cagaaggtatgtagagttttgagaagttattatttatctgcccttgagcttgtaactaat gctgatggagcctcaaatggggaaatggttaccactggacatcgaaatcctcgtcttcac ttgaaggaagctagatcaagggtagaggaaactttaggagcatgtctacttccttctttg caacttgtacctgcaaatccagctgttgggcaagagatttgggaagtaatgaatctcctt ccctatgaggtgcgatatcggttatatggcgagtgggaaaaggatgatgagcggaatcct acaatattagctgcaagacaaactgccaagctggacacaaggaggattttgaaacggttg gctaaggaaaatttgaagcagttaggtcggatggttgcaaaacttgctcatgctaatcca atgactgtactgcgtaccattgttcaccagattgaagcatacaaggatatgattactcct gttgttgatgcattcaagtatttgactcagcttgagtatgacattttggaatatgttgtg attgaacgacttgcacaaggaggacgagataaactaaaggatgatggtctaaatttgtca gattggcttcaatctttggcatcattttggggacacctgtgtaagaaatacccatcaatg gaactgagaggtcttttccagtacctggttaatcagttaaaaaagggccaaggaattgaa cttgttctcctgcaggagcttattcaacaaatggcaaatgtacaattcacagaaaatctg accgaggagcagttggatgccatggctggaagtgagactcttcgatatcaagccacttca tttggtgcaactcgaaataataaggcattgatcaaatctaccaataggctcagagattcg ttgcttccaaaggatgaacctaagttggctattccacttttgttgcttatagcgcaacat cgttctttggttgtcataaatgcagatgctccttacattaagatggtcagtgagcagttt gacagatgccatgggactcttcttcagtatgtagaattcctatgtagtgcagtgacacca gctgctgcttatgctcaattaattccctcacttgatgatcttgttcatatgtaccacctt gatcctgaggttgcatttttgatatatcgtcctgtgatgaggctcttcaagtgtcaaggc agtcatgatgttttctggcctttagatgccaatggaactgcagatattactgtggcatgc tcagagtctgaaagtaaggatgattctagccgagtgatactggacttgggtcctcctcgg aagcccacaatgtggtctgaacttcttgacactgttaaaaccatgttgccttctaaagcc tggaatagtctctctcctgacctctatgccactttttgggggcttacactgtatgatctt tatgttcctagaaatgtttatgagtctgaaattgcaaagcagcatgctgctcttaaggct cttgaagagcttcccgataattctagttcagcaattaacaaaaggaaaaaagacaaggaa agaattcaagaagccttagatcgtctaattagtgaacttcataagcacgaggaaaatgtt gcatctgtccgtaggcgacttactcgtgaaaaagacaggtggttgagttcctgccctgat actcttaagattaacatggagttcctccagcgttgtatatttcctcgatgtaccttcagc atgccagatgcggtctattgtgcaatgtttgtccatactctccattccctgggcacacct tttttcaacacagtgaatcatattgatgttctgatatgcaaaaccttgcaacccatgata tgctgttgcaccgagtatgaagcaggaagactagggaggtttctgtatgaaacactaaag attgcatactactggaagagtgacgaatccatctatgagcgggagtgtggaaatatgcca ggctttgctgtgtattatagatatccaaatagccagcgtgttacatatggacagttcata aaggtacattggaaatggagccaaagaatcacaaggttattgatccaatgtttggaatca accgagtacatggagattcgtaatgctttaataatgctgacaaaaatttcaagtgttttc cctgttaccagaaagagtgggattaacctagaaaaaagggttgctaaaattaaaaatgat gaaagagaggatctcaaggtgttggcaacaggtgttgctgctgctttggctgctagaaag tcttcatgggttactgacgaggaatttggaatgggatatcttgagctgaagcctgtacca ccaattgcttcaaaatctgttgctggtaacacagttgctgcacagaatggttcatcagtt aatgtttcccagaatgaggctgctggtggcagggcagttgcccttggaacccaacagtcg gatgtgaatttggtcaaggaccaggtttcaagaacaaaacctgatgggcgattggaaaga gcagaaaatgcccctcttggtaaatctgatttgaaaacaaaaggtggtacatcagccaat ggctctgatgctgcgttatctgttacattagctgcttcacaagctggaacagaaaaatca catgaaaatcagaaacagccagatgattcttctaataaattggataagcatgcagctaaa actcctgcgaaaaactctgctgaatcagagttaaaggcctcttccaaacgctctgtccct gttggatctctaacaaagacacagaagcaagatcatggaaaagatgatggcaagtcgggg aaagctgttggaagaacttctgcaatctctgtcaatgatagagatgttccctctcataca gagggtagacaaggtgggactacaaatgtttcttcagctatcacttccaatgggaaagat gatagctctgaagcaccagatgcatcaaggccatcttctcgaattgttcattctcccaag catgattgttctgctactgcttctaagtccagtgataaggtgcaaaagagaactagtcca gtggaagagactgacagattaagtaagcgccgtaaaggggatgttgaagtgaaagatctg gatggtgaagttcgagtatctgacagggagaggtccactgaccttcgatcagcagatttt gataagcctggaactgatgaagtaacaagctacaggactggggataagcctttggataga tcaaaagataagggaagtgagagacatgatagggattacagagatagattggagcgctct gaaaagtcccgggcagatgatattttgactgagaagtcaagagatagatcaatagagaga cacggaagagagcgttctgttgagagaagcattgataggaatttggatagacttggtgat aaagctaaggatgagcgcagcaaagacgaaagaagtaaagtacgatatgctgatacatcc atagaaaagtctcatgctgatgaccggtttcatgggcaaagcttgccgccaccaccacct ttacctcctcatatggtcccacaatctgttaatgctactggtagaagggatgatgatcct gacagaaggtttggtagtacaagacacactcaaagactctctccaagacatgaagagaag gagcggagacggtcagaagaaaatttgttggtttcccaggatgatggaaagcgcagaaga gaggatgactttcgagagagaaagcgagaggaaagagagggattgtcattgaaggtggaa gagagggaaagagacagagagagggacagagagaaagcaaatgttgtgaaagaggatgat gttgatgctactggtgccaaaaggcggaaactcaagagagagcatttgccatcagagccc ggggaatattctccagttgcccctcctcccccacctctctccattggtatgtcacaatca tatgatggaagagagagagaccgaaagggtaccatgatgcagcgtgggggttacttggaa gaaccagggatgaggattcatgggaaagaggcaaccggcaagatggctcgtcgagaacca gacccattgtatgatcgggaatgggacgatgagaaaagacagagacctgagcagaagcgg aggcatcggaagtaa

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