KEGG   Gossypium arboreum (tree cotton): 108475965
Entry
108475965         CDS       T05776                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108475965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108475965
Spliceosome [BR:gab03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108475965
 Complex B
    108475965
 Complex C
   U2 SnRNP specific factors
    108475965
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 108475965
NCBI-ProteinID: XP_017633467
LinkDB
Position
3:40006934..40011058
AA seq 817 aa
MPGVMPILPLPAPPSDGDLGPLPPSQVPEAQNEEIQTNEEQNKANSVATHTRTIGIIHPP
PDIRNIVDKTAQFVAKNGPEFEKRIIANNANNVKFNFLTSSDPYHAYYQHRLSEFRAQNQ
NQPNSQQQQPQLQSADSAPAETATAAAADGNDAVVAVAKPDPASLFRLPVRKNLEPPEAA
QYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFNFLRPTHSMFTFFT
ELADAYSKVLMPPKGLTEKLRKSVVDMTTVLERCLHRLEWERSQEQARQKAEDEIEQERM
QMAMIDWHDFVVVETIDFADDEDEDLPPPMTIEEVIRRSKITAMEEDEIVEPGKEVEMEM
DEEEVQLVEEGMRAASIGENDGEKKDIRVNEDPEPPMRIVKNWKRPEERITAERDPTKFV
VSPITGELIPINEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTR
PDIFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQAMSQTIMGEDQNDAA
NSISQNLPGPAAPPPRPGVPSVRPLPPPPGLALNLPRVPPNAPQYSAASSGGLPMSLPQP
RPIGVPVMQSMRQAPPPMQMAPGQQSMMMNRPPQMSPTMSMNPVNMPVPPPPGSQFTAVS
VPRPFAPLPVPPPSMPMMQPPPPLPQGIPPPPPPEEAPPPLPDEPEPKRQKLDDAKLVPE
DQFLAQHPGPACITVSVPNLDEGNLKGQLLEITVQALSETVGSLKEKIAGEIQLPANKQK
LSGKAGFLKDNMTLAYYNVGAGETLALSLRERGGRKR
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgccaggggtaatgccaatattgccccttccggcacccccttctgatggggatttaggc
ccattacctccatctcaggtgccagaggctcaaaatgaggagattcaaacgaatgaagaa
cagaacaaagctaactcagttgcaactcatactagaactattggaatcattcatcctcct
cctgatattagaaatattgttgataaaactgctcagtttgttgccaaaaatggacccgaa
ttcgagaaaagaatcattgctaataacgctaacaatgtcaagttcaatttcttgactagt
tcagatccataccatgcttattatcaacataggttgtctgagtttcgtgctcagaatcag
aaccagcccaactcccagcagcagcagccgcaattgcagtctgctgattcagctccagct
gagactgctacagctgcagctgcagatgggaatgatgcagtagtggcagtagctaagcct
gatcccgcttcgctgtttagactgcctgtgcggaagaatcttgaaccaccggaagcagcc
caatatactgttagacttcctgaagggattacaggggaagagttggatattattaagctg
actgcacagtttgttgcacgaaatgggaaatcattcttgactgggttgaccagtagggag
attaataatccccagttcaattttttaaggcctactcacagtatgtttacctttttcacc
gaacttgctgatgcatattccaaagtgttgatgcctccaaagggcttgacagaaaagttg
aggaagagtgttgttgatatgacaactgtgcttgagaggtgcttgcaccggctggaatgg
gaacgctcgcaggagcaggcaaggcagaaagctgaggatgaaattgagcaggagagaatg
caaatggcaatgattgattggcatgattttgttgtggttgagactatagactttgctgat
gacgaggacgaggacttacctcccccaatgaccattgaggaggtaataaggaggagcaag
atcactgctatggaagaagatgagattgttgagcctggaaaggaggtggaaatggaaatg
gatgaagaagaggtacagcttgttgaggaaggcatgagagctgctagcattggagagaat
gatggtgagaagaaggatataagggtaaatgaggaccctgaaccaccaatgagaattgtg
aagaactggaagaggcctgaggagagaatcactgctgaaagagatcctaccaagtttgtt
gtctcaccaataactggtgagctaattcccattaatgagatgtctgaacacatgagaatt
tccttaattgatcccaagtacaaggagcagaaagaaaggatgtttgcgaagattagggag
acaactcttgctcaggatgatgagatatctagaaacattgtgggacttgcacgcacacgt
cctgatatctttggtaccactgaggaagaagtatctaatgctgtcaaggctgaaattgag
aaaaagaaagatgagcaaccaaaacaggttatatgggatggtcacactggaagcattgga
cgaaccgcaaaccaggctatgtctcaaaccatcatgggagaagatcaaaatgatgctgct
aacagcatttcacagaaccttcctggtcctgctgctcctcctcctcgacctggtgtccca
tcagttcgtcccctccccccacctcctggactagctttaaacctccctcgtgttcctcca
aatgctccccaatattctgccgcatctagtggggggcttcctatgtcgttacctcaacct
cgtccaattggtgttccagtaatgcagtcaatgcgtcaggcaccacctcctatgcagatg
gcacctggccaacaatccatgatgatgaatcgaccaccacaaatgtctccaacaatgtcc
atgaacccagttaatatgcctgtgccccctccacctggttctcaatttactgctgtctca
gttcctcgaccctttgccccacttcctgtcccaccaccttctatgcccatgatgcagcca
cctccacctttgcctcaaggaattcctccaccaccaccacctgaagaagctcctccacca
cttcctgatgagccagagccaaaaagacagaaacttgatgatgccaagcttgttccagaa
gatcagtttcttgctcaacatccgggtcctgcttgcattactgtgtctgttcccaacctt
gatgaagggaatctcaaaggacaacttcttgagatcactgtgcaggccttatctgaaaca
gttggcagtttgaaggagaaaattgcaggggaaattcagcttcctgcaaataagcagaaa
ttgagtggaaaagctgggtttctgaaggacaatatgacccttgcatattacaatgttgga
gcaggagaaacgcttgctctttcattgagggaacgtggtgggaggaagaggtga

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