Gossypium arboreum (tree cotton): 108475981
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Entry
108475981 CDS
T05776
Name
(RefSeq) adoMet-dependent rRNA methyltransferase spb1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108475981
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108475981
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Cystatin
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
108475981
NCBI-ProteinID:
XP_017633497
UniProt:
A0A0B0MW20
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Position
3:1714872..1719044
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AA seq
853 aa
AA seq
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MGKVKGKHRLDKYYQLAKEHGYRSRASWKLVQLDSKFSFLKSAHAVLDLCAAPGGWMQVA
VQRVPVGSLVLGLDLVPIAPIRGAVALQQDITKSECKSKVKRVMEEHGVMAFDVILHDGS
PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKIFRSQDYSSVLYCLKQLFERVE
VDKPAASRSASAEIYLLGLKYKAPAKIDPRLLDVKHLFQGSTEPQKKVIDVLRVSKQKRH
RDGYEDGETISKKASTAADFTWSDSPLEILGSVTSITFADPASLPIKDHSSTTEEVKALC
DDLRVLGKQDFKYLLKWRMQLRKALSPEKATPTPTPSTVTDVNKGDEENEDDKLLNEMEE
LTYAMERKKKREKKLLAKRQAKDKSRKATGMQIDALEDGYVDHELFSLSSIKGKKDLAAV
DSNEFDDGNVDVRGSEDEENQENTEDESSSDIDSDEERRRYDERIEEILDHAFEEYAAKK
DGKTKQRKRVKQAYEQLEGDDDDDVMISDHDSDKDVADLEANPLMVSLDNGEGPTQEEIT
NRWFSQDIFGEAVEQGDLGKYNDSGDEMEVDNRDEKPVIPEKSKAKKKQDEKTSIPDKAK
EKKVNNAAGPKNTKLQAASKAEDDFEIVPAPATDSSDNSSSDDSEDDDFETKAEILACAK
KMLRKKQRDQILDDAYNKYMFDDDGLPKWFLEEEKRHRQPIKPVTKEEIAAMRAQFKEIN
ARPAKKVAEAKARKKRIAMKKLEKVRQKANSISDQADISERSKRKQIEQLYKKATPKKPQ
REYVVAKKGVQVRAGKGKVLVDRRMKKDARARGTGKSGKGSSKKGKNGKADKKGKGSGKA
SGRKGNKNKGSHA
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagtgaagggaaagcatagattagataagtactaccaattagccaaagaacac
ggctaccgttcccgagcatcatggaaattagttcagctcgattccaaattctcgttccta
aaatcagcccacgccgttctcgacctttgcgccgctcccggtggttggatgcaagtcgcg
gtacaacgtgttcctgtcggcagcctcgtgctgggcctcgatctcgttcccatcgctcct
atacgaggtgccgtcgctctccaacaagacataactaaatccgaatgcaaatccaaggtt
aaacgggtgatggaagaacatggtgttatggcatttgatgttattttgcatgatgggtca
cctaatgttggtggagcttgggctcaagaagcaatgagtcaaaatgctttggttattgat
tctgttaagttggctacccaatttttagcccctaaaggcacttttgttaccaagattttt
aggtcccaagattacagttctgttctttattgtctcaaacagttatttgagagggttgaa
gttgataaaccagcagctagtcgttcagcatcagctgagatttatcttctgggtttaaag
tataaagcccctgcaaagattgatccacgtcttcttgatgttaaacatttgtttcaagga
tcaacagagccacaaaagaaggtgattgatgtacttagggtatcgaaacaaaagagacac
cgtgatggttatgaagatggagagacaatctcgaagaaggcgtctactgctgctgacttc
acttggtccgattctcctctcgaaatccttggttcggttacttccataacctttgcagat
ccggcttcattgcctattaaggatcacagctccaccacagaagaggtcaaagctctttgc
gatgatttgcgtgttttaggaaagcaagatttcaagtaccttttgaagtggcggatgcaa
ttgagaaaagctttgtctcctgaaaaggctactcctactcctactcctagtactgttact
gacgtcaataaaggggatgaggagaatgaagatgataagttactcaatgagatggaggag
ctcacgtatgccatggagcgtaagaagaaaagagagaagaagcttcttgcaaaaagacag
gcaaaggacaaatcacggaaggcaacgggaatgcaaatcgatgccctggaagatggttat
gttgatcatgagttgttttctctttcttctattaagggtaagaaagatcttgcggcggtt
gattccaacgagtttgatgatgggaatgttgatgtaaggggtagcgaagatgaagaaaac
caagagaacactgaagatgagtcatccagtgatatcgattctgacgaagaacgaagaaga
tatgatgaaagaatcgaagagatccttgatcacgcttttgaagagtatgcggccaaaaag
gatggaaaaacaaagcagaggaagcgtgtgaaacaagcctatgagcaattggagggtgat
gatgacgatgatgttatgatttccgatcatgattcagacaaggatgtggctgatcttgaa
gcaaatcctcttatggtatcactagacaatggggaaggaccaactcaggaagaaattaca
aacaggtggttcagtcaggatatttttggtgaagctgtagagcaaggggatttagggaag
tataacgacagtggtgatgaaatggaggtcgataatcgagatgaaaagccggttattccc
gagaagtcaaaagcaaagaaaaagcaggatgaaaaaacttctattcctgacaaggccaag
gagaagaaagtaaacaatgctgccggccccaaaaacaccaaactccaggctgcttctaaa
gcagaggatgatttcgagattgtcccggcaccggctacagattcaagtgacaactcatct
tcagatgactcagaggatgacgactttgaaacgaaagctgagatattagcttgtgctaag
aagatgctaaggaaaaagcaaagggaccaaattcttgatgatgcttataataaatatatg
tttgatgatgacggtttaccgaaatggttcttagaggaggaaaagaggcatcgccaacca
attaagcccgttacaaaagaagagattgctgcaatgcgtgcacaattcaaagagatcaac
gctcgaccggctaagaaagttgcagaggcaaaagcacgaaagaagcggattgcaatgaaa
aagctcgaaaaggtacggcagaaagcaaacagtatttcagaccaagctgacatctccgaa
aggtcaaagaggaagcaaattgaacaactctacaagaaggctacacccaaaaagccccaa
agggaatacgtggtcgcgaagaagggggttcaagttagggctggcaaagggaaagtcctt
gttgatcgacggatgaagaaggatgctagggcacgagggacgggtaaatccggaaaaggc
agttcaaagaagggaaagaatggtaaagctgataagaaaggtaaaggttctggcaaggct
tcagggaggaagggaaacaaaaacaaaggtagccatgcatga
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