Gossypium arboreum (tree cotton): 108476028
Help
Entry
108476028 CDS
T05776
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108476028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108476028
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108476028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_Zer-1
LRR_At1g61320_AtMIF1
F-box_4
RsmF_methylt_CI
LRR_8
Motif
Other DBs
NCBI-GeneID:
108476028
NCBI-ProteinID:
XP_017633568
UniProt:
A0A0B0P3E6
LinkDB
All DBs
Position
3:125581825..125585067
Genome browser
AA seq
372 aa
AA seq
DB search
MIGEAKVGNEDLNLCFEKLMMVAAGNSEGLKMNSVGITEWKDIPVELLLRIVSLLDDQTA
IVASSVCSGWRDAICLGLTQLCLSWCRKNMNNLVLSLAPKFTRLQTLILRQENPQLEDNA
VESISKFCHDLQDLDLSKSFKLSDRSLYALAHGCPNLKKLNISGCTSFSDEALAYLTNFC
RKLKILNLCGCVKAATDHALQAIGRNCNMLQSLNLGWCDNVGDLGVMSLAYGCHDLRCLD
LCGCVRITDDSVIALANECLHLRSLGLYYCRNITDRAMYSLAHSRVKNKGSMWESSMKGR
YEDDGLKSLNISQCTALTPSAVQALCDTFPALHTCSGRHSLVMSGCLNLTSVHCACAVQA
HRTFNTIFHTAH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgattggtgaagcaaaagttgggaatgaagacttgaacttatgctttgagaagctgatg
atggttgcagctgggaatagtgagggacttaagatgaatagtgtggggatcactgagtgg
aaagatatccctgtggagctgctgttgagaatcgtttcactactcgatgatcagaccgct
atcgttgcttccagtgtctgtagtgggtggagggatgccatttgcttgggcctcacacaa
ctctgtctctcatggtgtagaaagaacatgaacaatttggttctatctcttgcacctaaa
ttcaccagactgcaaactctgatattgcgccaagagaatccacagctcgaggacaatgct
gtcgagagtatttcaaagttttgtcacgatctgcaggacctggacctcagcaaaagtttc
aagcttagtgatcgctccttgtatgcattggctcacggttgtcctaaccttaaaaagctt
aacatcagcggctgcacatcattcagcgatgaagctctcgcgtatttgactaatttttgt
cgaaaactaaaaatattaaatctgtgcggatgtgttaaagctgcaactgaccatgcactg
caggctattggacgaaactgcaatatgttgcaatctttgaatctgggatggtgtgacaat
gttggtgatctcggagtcatgagtttagcatacggatgccatgatctccgatgcctggac
ctgtgtggttgtgttcgtataacagatgatagcgtgattgctttagcaaacgagtgtctc
catttgaggtcgctcggactgtactattgccgtaacatcacagacagggcgatgtactca
ttggctcatagccgagtgaagaacaaaggttcgatgtgggagtcgtcgatgaaaggtaga
tatgaagatgatggtttaaaaagtctgaatataagccagtgtacggcactgactccatca
gcagttcaggctttatgtgacacattccctgcacttcatacctgctctggaaggcactcc
cttgttatgagtggttgcttgaacttaacctccgtgcactgtgcttgtgcggttcaagct
caccggaccttcaacactattttccatacagctcattga
DBGET
integrated database retrieval system