KEGG   Gossypium arboreum (tree cotton): 108476028
Entry
108476028         CDS       T05776                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108476028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gab04121]
    108476028
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     108476028
SSDB
Motif
Pfam: LRR_6 LRR_4 F-box-like F-box LRR_At5g56370 LRR_Zer-1 LRR_At1g61320_AtMIF1 F-box_4 RsmF_methylt_CI LRR_8
Other DBs
NCBI-GeneID: 108476028
NCBI-ProteinID: XP_017633568
UniProt: A0A0B0P3E6
LinkDB
Position
3:125581825..125585067
AA seq 372 aa
MIGEAKVGNEDLNLCFEKLMMVAAGNSEGLKMNSVGITEWKDIPVELLLRIVSLLDDQTA
IVASSVCSGWRDAICLGLTQLCLSWCRKNMNNLVLSLAPKFTRLQTLILRQENPQLEDNA
VESISKFCHDLQDLDLSKSFKLSDRSLYALAHGCPNLKKLNISGCTSFSDEALAYLTNFC
RKLKILNLCGCVKAATDHALQAIGRNCNMLQSLNLGWCDNVGDLGVMSLAYGCHDLRCLD
LCGCVRITDDSVIALANECLHLRSLGLYYCRNITDRAMYSLAHSRVKNKGSMWESSMKGR
YEDDGLKSLNISQCTALTPSAVQALCDTFPALHTCSGRHSLVMSGCLNLTSVHCACAVQA
HRTFNTIFHTAH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgattggtgaagcaaaagttgggaatgaagacttgaacttatgctttgagaagctgatg
atggttgcagctgggaatagtgagggacttaagatgaatagtgtggggatcactgagtgg
aaagatatccctgtggagctgctgttgagaatcgtttcactactcgatgatcagaccgct
atcgttgcttccagtgtctgtagtgggtggagggatgccatttgcttgggcctcacacaa
ctctgtctctcatggtgtagaaagaacatgaacaatttggttctatctcttgcacctaaa
ttcaccagactgcaaactctgatattgcgccaagagaatccacagctcgaggacaatgct
gtcgagagtatttcaaagttttgtcacgatctgcaggacctggacctcagcaaaagtttc
aagcttagtgatcgctccttgtatgcattggctcacggttgtcctaaccttaaaaagctt
aacatcagcggctgcacatcattcagcgatgaagctctcgcgtatttgactaatttttgt
cgaaaactaaaaatattaaatctgtgcggatgtgttaaagctgcaactgaccatgcactg
caggctattggacgaaactgcaatatgttgcaatctttgaatctgggatggtgtgacaat
gttggtgatctcggagtcatgagtttagcatacggatgccatgatctccgatgcctggac
ctgtgtggttgtgttcgtataacagatgatagcgtgattgctttagcaaacgagtgtctc
catttgaggtcgctcggactgtactattgccgtaacatcacagacagggcgatgtactca
ttggctcatagccgagtgaagaacaaaggttcgatgtgggagtcgtcgatgaaaggtaga
tatgaagatgatggtttaaaaagtctgaatataagccagtgtacggcactgactccatca
gcagttcaggctttatgtgacacattccctgcacttcatacctgctctggaaggcactcc
cttgttatgagtggttgcttgaacttaacctccgtgcactgtgcttgtgcggttcaagct
caccggaccttcaacactattttccatacagctcattga

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