Gossypium arboreum (tree cotton): 108476132
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Entry
108476132 CDS
T05776
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00730
Thiamine metabolism
gab00900
Terpenoid backbone biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
108476132
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108476132
Enzymes [BR:
gab01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
108476132
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_C_1
DUF1829
Motif
Other DBs
NCBI-GeneID:
108476132
NCBI-ProteinID:
XP_017633728
UniProt:
A0A0B0NT02
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All DBs
Position
8:100418563..100423673
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AA seq
713 aa
AA seq
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MGTAPTQCPSGITANFHAKFDSRTEFSCSSFPSTLNLSKLNSHPTSKGLVNKIGSLPDID
DLFWEKAPTPILDVVENPAHLKSLSIKELKLLADEIRLELSSTKSKTQRSFKASLAAVEL
TVALHYVFHAPVDKILWDAGEQTYAHKILTGRRILMPTLRQKNGLSGYTSRTESEYDPFG
AGHGCNSISAGLGMAVARDINGKRERVVTVINNTTTMAGQVYEAMSNAGYLDSNLVVILN
DSRHSLHPKIEEGPKTSINALSSTLSRIQSSKSFRKFREAAKDVTKRIGMGMHELAAKVD
EYARGMMGPLGSTLFEELGLYYIGPVDGHKLEDLICVLQEVASLDSMGPVLIHVITEENQ
CSEDNQKKVTVEKQQEGLSLNDIYSFSNDGHCRTYSDCLVEALVMEAEKEKDIVVVHAGT
EMDPSLRLFRERFSDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSAFLQRAYDQVVHD
VDRQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAASDEDELIDMVATATR
IDDRPVCFRYPRGALVRTDYPIHGGSALEIGTGKVLVEGKDVALLGYGAMVQNCLKAQAL
LAKLGINVTVADARFCKPLDIKLLRWLCSNHDILITVEEGSVGGFSSHVAQFIALDGQLD
GRLKWRPIVLPDNYIEHASPKEQLALAGLTGHHIAATTLSLLGRTREALLLIC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgctccaacccagtgcccttctggaatcactgcaaattttcacgccaaattt
gatagcagaactgagttttcatgctccagtttcccctctacccttaatctttcgaagctt
aacagccaccccacatcaaagggattagtaaataaaataggctctttgcctgatattgat
gatttgttctgggagaaagcccctacacctatacttgatgtggttgaaaaccccgcccac
ttgaaaagcttgagtatcaaggaactgaaattactagcagatgaaatccgtttggaattg
tcttctacaaagtcaaaaactcaaagatccttcaaggccagtttggcagcagttgagttg
acagtcgcattacactatgtttttcatgctccggtggacaagatactctgggatgccggg
gaacagacatatgcacataaaattcttacaggaaggcggatcctcatgcctacgttgaga
caaaagaatggtctttctggctatacttctcgaactgagagtgaatatgatccttttggg
gctgggcatgggtgtaacagtatatctgctggacttggtatggcagtagcgcgggatatt
aatggcaagcgggaacgtgtagttacagtaattaacaataccacaactatggctggtcag
gtctatgaggccatgagcaatgctggttatttggattcaaatctggttgtgatcttaaat
gacagccgccattctttgcatccaaagatagaagagggccccaagacatccatcaatgct
ctatccagtacccttagcaggatccaatcaagtaaatcttttcgtaagtttagagaagct
gctaaggatgttaccaaaagaatcggtatgggaatgcatgaactagcagccaaagttgat
gagtatgcacgtggtatgatgggtccacttggatcaactctctttgaagagcttgggctg
tattatataggtcctgttgatggacacaaattagaagatctgatatgtgttctacaagaa
gtggcgtctctggattcaatgggtccagtgttgattcatgtgataacagaggaaaatcaa
tgttcagaagataaccaaaagaaagtgacagtggagaagcagcaagaaggtttaagtctg
aatgacatttactctttctcgaatgatggccattgccgaacttatagtgactgcttggtg
gaagctttggttatggaggcagagaaagaaaaagatattgtagtagttcatgctggaaca
gaaatggatccatcacttaggttattccgagaaagattttccgacagattttttgatgtg
ggaatggctgagcaacatgcagttacattttctgctggtttatcatgtggagggttgaag
ccattttgtataattccttctgccttcctgcagagagcttacgatcaggttgtccatgat
gtagatcggcagaggattcctgtgcgatttgtcattacgagtgcaggattggtaggatct
gatggtccgttgcagtgtggggcatttgatataactttcatgtcatgtttgccaaacatg
attgtcatggcagcatcggatgaggatgagctgatagacatggttgccactgctaccagg
attgatgatcggccagtctgctttcggtacccaaggggtgccctagtgaggacagactat
cctatacatggtggaagtgctcttgagattggaacaggaaaagttcttgttgagggtaaa
gatgttgctttacttgggtatggggcaatggttcaaaactgtctcaaagctcaggccctt
cttgccaagcttggcatcaatgtaactgttgctgatgcaaggttctgcaagcctctcgat
atcaagcttctcaggtggctttgtagcaatcatgacattctgataaccgttgaggaaggt
tccgttggaggatttagttctcatgttgcgcagttcattgcgcttgacggacagctcgat
ggaagactcaagtggcgaccaattgtcttgccagacaactatatcgagcatgcatcaccg
aaagaacagcttgctcttgctgggctgactggacatcacattgctgcaaccacattgagt
ctcctcggacgtacccgtgaagcgttacttttaatttgctag
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