Gossypium arboreum (tree cotton): 108476135
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Entry
108476135 CDS
T05776
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108476135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108476135
Spliceosome [BR:
gab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108476135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
108476135
NCBI-ProteinID:
XP_017633733
UniProt:
A0A0B0PVX3
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Position
3:14741634..14747276
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEADVLDEENNDVANMEEDIDGDLADIETLNYDDLDSVSKLQK
SQRYIDIMQKVEDALEKGSHISNQGMVLEDDPEYQLIVDCNGLSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTVDACDRALALDTAKKKVLDFVESRMGYIAPNLSTIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKTLAGFSTATSQFRVGYIEQTEIFQTTPPALRSRACRLLASK
ATLAARIDSTRGDPLGNAGKTLKEEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactttagctgattcattccttgcggaccttgatgaattatcagacaacgaagcc
gatgttctggacgaagaaaataatgatgtcgcaaacatggaagaagatattgatggtgac
cttgcggatatcgaaacgcttaactacgatgatctggacagtgtttccaaattgcaaaaa
agtcagagatacattgatattatgcagaaagtggaagatgcgctcgagaagggttctcat
atatcaaatcagggcatggtactggaagatgatcctgagtatcagctgattgtggactgt
aatggactatcagttgatatcgagaatgagattgttattatccataattttatacgtgat
aagtaccgattgaagtttcctgagcttgaatcgcttgtgcatcatccaattgattatgct
cgtgtggtgaaaaagattggcaatgagatggatttaacccttgtggatttggaagggctt
ttgccttcagctatcattatggttgtttcagttacagcatcaactaccagtggcaagcca
cttcctgaagatgttctccagaaaactgttgatgcgtgtgatcgtgctctggctctggat
actgcaaagaagaaggttcttgattttgtagaaagtagaatgggatatattgcaccaaat
ctttctactattgttggaagtgctgttgctgctaaacttatgggtactgctggcggtctt
tcagcattagctaagatgcctgcttgtaatgttcagctgcttggtgcgaagaaaaagacc
cttgcagggttttccactgcaacgtcacagtttcgtgttgggtatattgaacagacagag
atttttcaaactacaccccctgctttgaggagtcgtgcttgtcgtctcttggcttctaaa
gcaactcttgcagcacgtatagactctactagaggggatcctttagggaatgctggaaaa
accttaaaggaagaaattcataagaaaattgaaaaatggcaagaaccacctcctgcaaag
cagcctaaaccacttcctgttcctgattctgaacctaagaaaaagaggggtggtcgtcgc
ttaaggaagatgaaagaaaggtatgctataacagatatgaggaagctagcgaacaggatg
caatttggagtacctgaggaaagctctttaggtgatggactaggtgaaggttatggaatg
cttggtcaggctgggagtggcaaactgcgtgtttcaattggtcagagcaaacttgcagcc
aaagttgctaagaagttcaaggaaaagaattacggaagcagtggtgccacctctgggctg
acttcaagtttggcattcacacctgtgcaggggattgagctcacaaatcctcaagctcat
gcacatcagcttggcagtggaactcaaagtacttacttctcagagacaggaacattttca
aagatcaagaggacatag
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