Gossypium arboreum (tree cotton): 108476162
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Entry
108476162 CDS
T05776
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 1-like isoform X1
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108476162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108476162
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
108476162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
PCMT
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
108476162
NCBI-ProteinID:
XP_017633769
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All DBs
Position
8:72917941..72920846
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AA seq
306 aa
AA seq
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MRPPRGRGGGGGFRGRGDGGRGRGRGGGGGGRGGDRGGSGMKPRGGGRGGGRGRGGGRGG
MKGGSKVVVEPHRHEGVFVAKGKEDALVTKNMVPGEAVYNEKRIAVQNEDGTKVEYRVWN
PFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDVVGPNGVVYAVEFSHRSGR
DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
HFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPFEQVTLEPFERDHACVVGGYRMPKK
QKAGAA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagacctccaagaggccgtggtggtggtggtgggtttaggggcagaggtgatggtggg
agagggagaggaaggggtggtggtggtggtggaagaggtggcgataggggaggcagtggc
atgaagccccgtggtggtggccgcggtggaggaagaggacgtggtggtggaagaggagga
atgaaaggtgggagcaaggttgtagttgagccccatagacacgagggagtttttgttgcc
aagggtaaagaagatgctcttgttactaagaatatggttcctggtgaggctgtctacaat
gaaaagaggattgctgttcagaatgaagatggaaccaaagttgagtacagggtttggaac
cctttccgatccaagttggcagctgcaattcttggtggtgttgataatatatggattaaa
cccggtgctaaggttctctaccttggagctgcttcgggtaccactgtttctcatgtatcc
gatgttgttggtcctaatggagtggtttatgctgtggaattttctcacagaagtggtagg
gatttggtcaacatggctaagaagcgaacgaatgttatacctatcattgaagatgctagg
catcctgctaaatacaggatgctagttggcatggtggatgtgatattttctgatgttgcg
cagcctgatcaggcaagaattctggctttgaatgcatcgtatttcctgaaggctggaggt
cattttgttatttcaatcaaggcaaactgcattgactcaacggtccctgctgaggctgta
ttccagagtgaagttaagaaattgcaacaggagcagttcaagcctttcgaacaagtcact
ctcgaaccatttgagcgtgaccatgcatgtgttgttggcggctaccgcatgccaaagaaa
cagaaagctggtgcagcctaa
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