Gossypium arboreum (tree cotton): 108476167
Help
Entry
108476167 CDS
T05776
Name
(RefSeq) chitinase 9-like
KO
K20547
basic endochitinase B [EC:
3.2.1.14
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00520
Amino sugar and nucleotide sugar metabolism
gab01100
Metabolic pathways
gab04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108476167
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108476167
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
108476167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_19
Chitin_bind_1
DUF6426
Motif
Other DBs
NCBI-GeneID:
108476167
NCBI-ProteinID:
XP_017633777
LinkDB
All DBs
Position
3:721550..723264
Genome browser
AA seq
324 aa
AA seq
DB search
MRLHTLLFSSLFLSYAVVLATAVQCGEGAGGALCPGGICCSRWGYCGTTDIYCLVENGCQ
LNCTDGDSGGGGGGGGGGGGGGGDGGALGDIISREMFEEMLPYRNDHRCPAANFYTYDAF
IAAAKLYPEFAATGDNDTRKREVAAFLGQTSHETNGCPPGYCDNNPNYPCYAGVNYCGRG
PIQLSWNYNYGQFGESIGQKEELLQRPEVLKTNVTMSFMSALWFWMTAQPPKPSCHSVIT
GEWTPSAGDIAAGRLPGYGVTTNTINGGLECGHGPDDRVKHRINYYERYCNMLGVSYGPN
LDCYNQRPFNWGLLLESIYIAYGV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagattacatacgttgttattttcttcattgtttttatcctatgcagtggttctagcc
acagctgtgcaatgtggcgagggagccggtggtgctttatgtcctggtggcatatgttgt
agcagatggggctattgtggcaccactgacatctactgcctcgtggaaaatggttgtcaa
cttaattgcactgatggtgactctggtggtggtggcggtggcggcggaggaggcggaggc
ggcggcggtgatggtggtgctcttggtgacattatatcgagggaaatgtttgaagagatg
ctgccatataggaacgatcatcgttgcccagccgctaacttctacacctacgatgctttc
atagctgccgcaaagttgtatccggagtttgcggcgactggcgataacgacactcggaaa
agggaagttgctgctttcttaggccaaacttcccacgaaactaacggttgccctccaggt
tattgcgataataacccaaattatccatgttatgctggtgtaaactattgtggccgcggt
cccattcaactttcttggaactataactatggccaatttggagaatccataggacagaag
gaggagcttttacaacgccctgaggtgctgaaaaccaatgttacaatgtccttcatgtct
gctctctggttctggatgactgcacaacccccgaagccatcgtgccacagtgtgatcacc
ggagagtggacaccttccgctggcgacatagccgctggtcggcttccagggtacggtgtg
accacaaatactatcaatggcggcttggaatgtggtcatggtccagacgatagggtaaag
catcgaattaattactatgaaaggtactgtaacatgcttggagttagctatggccccaac
cttgattgctacaatcagaggcctttcaactggggtctcttactggagtctatttatata
gcttacggtgtctga
DBGET
integrated database retrieval system