Gossypium arboreum (tree cotton): 108476174 Help Entry 108476174         CDS       T05776                                  Name (RefSeq) squalene synthase 2-like   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism gab  Gossypium arboreum (tree cotton) Pathway gab00100   Steroid biosynthesis gab00909   Sesquiterpenoid and triterpenoid biosynthesis gab01100   Metabolic pathways gab01110   Biosynthesis of secondary metabolites Brite KEGG Orthology (KO) [BR:gab00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     108476174   09109 Metabolism of terpenoids and polyketides    00909 Sesquiterpenoid and triterpenoid biosynthesis     108476174  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:gab01006]     108476174 Enzymes [BR:gab01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      108476174 Prenyltransferases [BR:gab01006]  Terpene biosynthesis   Squalene/phytoene synthase    108476174 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Motif Other DBs NCBI-GeneID:  108476174 NCBI-ProteinID:  XP_017633785 LinkDB All DBs Position 3:complement(1462801..1468458) Genome browser AA seq 412 aa AA seqDB search MGSLGALVKHPDDFYPLLKLKMASRHAERQIPSEPHWAFCFSMLHKVSRSFALVIQQLDT ELKNAVCIFYLVLRALDTVEDDTSVATDIKVPILKEFYRHIYDPDWHFSCGTKNYKVLMD EFHHVSTAFLELEKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL SKLFHACGTEDLAPDTLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWGKYVNKL EDLKYEENSVKAVQCLNDMITNALIHVDDCLKYMSALPDPAIFRFCAIPQVMAIGTLALC YNNIEVFRGVVKMRRGLTAKVIDRTNTMADVYGAFYDFSCMLKAKVDKNDPSAQKTSSRL DSILKTCRDSGVLNERKSYIIPNQTNYTPLLAVLLFILLAIIFGNRGPSGPN NT seq 1239 nt NT seq  +upstreamnt  +downstreamnt atggggagtttaggagctcttgtgaaacacccagatgatttttatccattgttgaagctg aaaatggcttcaaggcatgccgagagacagatcccatcagagcctcactgggctttttgt ttctctatgcttcacaaagtatctcgtagttttgctctcgttattcaacagctcgacacc gagcttaaaaacgctgtctgcatattttatttggttcttcgagctcttgatactgttgag gatgacactagtgtggcaacagatatcaaagttcctattcttaaagaattttatcgtcat atatatgatcctgattggcacttttcgtgcggtacgaagaactacaaagttcttatggat gagtttcatcatgtatctactgcttttttggaactcgaaaaaggttatcaggaggcaatt gaggatattacaaaaagaatgggtgcaggaatggcaaaatttatttgcaaagaggttgaa acagttgatgactacgatgaatattgtcactatgtagcaggactcgtgggattaggtctt tccaaacttttccatgcatgcggtacagaagatttggctcccgatactctctccaattca atggggttatttcttcagaaaacaaatataatccgagattatctcgaggatatcaatgag ataccaaagtcgcgtatgttttggcctcgtcaaatttggggtaaatatgtcaacaaactt gaggacttgaaatatgaggaaaactcggtcaaggcagtgcagtgcttgaatgacatgatt actaatgctttaatacatgtggatgattgcctaaaatacatgtctgctttacctgatcct gcaatctttcgattttgtgctatccctcaggtcatggctatcggaacactagccttatgc tacaacaacatcgaagtcttcagaggcgtagtgaaaatgaggcgcggtctcactgcgaaa gtcattgaccgaaccaacacgatggctgatgtctatggtgctttctatgatttttcttgt atgttgaaagctaaggtcgacaaaaacgatcctagtgcacaaaaaacatcgagcagactt gattcgatcctcaagacttgcagggactcaggggtcctgaatgaaaggaaatcttacata attccaaatcagaccaattacactccacttctggctgtcttgcttttcattttactggcc attatttttggcaatcgaggccccagtgggccaaattaa

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