Gossypium arboreum (tree cotton): 108476175
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Entry
108476175 CDS
T05776
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108476175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108476175
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108476175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
108476175
NCBI-ProteinID:
XP_017633822
UniProt:
A0A0B0NSN8
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All DBs
Position
7:90851808..90855701
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AA seq
477 aa
AA seq
DB search
MFENGKLFIGGISWDTNEGHLKEYFNTFGEVIEAVIMKDRTTGRARGFGFVVFADPIVAE
RVVKEKHSIDGRIVEAKKAVPRDDQNVMSRSTSSIHGSPGPGNTRKIFVGGLASTVTESD
FKKYFDQFGNITDVVVMYDQNTQRPRGFGFITYDSEEAVDKVLLKNFHELNGKMVEVKRA
VPKELSPSPSHSPISGYNYDLNRVNNFLNGYTQGYSPSNVGGYGLRVDARFSPVTNGRNR
VPPLCSGYAMGMNIEPKLNPSFGNSASLSSNMSYRRGLSPYYVGNTNRFCSPIGNDGSSG
GNTSFFSSVTRTLWGNGGLDYNTNASSSSPYVGSGSGTIGENASGNGGINWGSSAISSQG
EGNNVSRNSVEFGYGSGDNSFGLGTTGYGRNSGTNLTPTSAYAASSGGYDGAFADLYGSA
SVYRDATRGSSMSEQDGSGSFGYGLDSATSGVLRKSSPGYIGGYSVNRRQANSGIAT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatgggaagctatttattggtgggatatcttgggacaccaatgaagggcat
ctcaaagagtatttcaatacttttggtgaagtgatagaggcagtgatcatgaaggatcgg
accactgggcgtgctcgtggttttggtttcgttgtttttgctgaccccatagttgctgag
agagtagtcaaggagaaacacagcattgatggcaggatagttgaagcaaaaaaggcggtt
cctagggatgaccagaacgttatgagtagaagcactagtagcatccatggttcacctggt
ccaggcaacacaagaaagattttcgtaggaggtttagcatctacagttacggagagtgat
ttcaagaagtattttgatcaattcgggaatatcacagatgttgtagtgatgtatgatcaa
aacacacaaaggcctaggggtttcgggttcatcacttatgattcagaagaggcggtggac
aaggtgttgctaaaaaatttccatgaactgaatggtaaaatggtcgaggttaagcgagca
gttcccaaagagttatcgcctagtcctagtcatagtcccatttctggatataactatgat
ctgaatagggtcaacaactttcttaatggttacactcagggatatagtccaagcaatgtc
ggaggctatggacttagggtagatgcgagattcagtccagttactaatggccgaaacagg
gttcctcctttatgttctggttatgcaatgggcatgaacattgagcctaagttaaacccg
agttttggcaatagtgcaagtcttagtagtaatatgagctatagacgaggattgagcccg
tactatgttggtaatacaaatagattttgtagtcctatcgggaatgatggaagtagtgga
ggtaatacttcctttttcagctcagtgaccaggaccctttggggaaatgggggacttgat
tataacacaaatgcttctagttccagtccgtatgttggatctggaagtggtactattgga
gaaaatgcttctggaaacggtggaattaattggggttcttccgcaatttccagtcaaggt
gaggggaataatgtttctagaaatagtgtggaatttggctatggaagcggcgataacagc
tttgggttggggacaacagggtatggaagaaacagtgggaccaatttgacaccaacatca
gcatatgctgcatcaagtggtggttatgatggagcctttgcggatctttacggcagtgct
tcggtttacagggatgccactaggggatcatcaatgtccgagcaagatggttctggttcc
tttgggtatggacttgatagtgccacttctggtgttctgcgtaaaagttctcctggttat
atcggtggttatagtgttaatagaagacaagcaaatagtggaattgctacctag
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