Gossypium arboreum (tree cotton): 108476181
Help
Entry
108476181 CDS
T05776
Name
(RefSeq) pectinesterase PPME1-like
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Module
gab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108476181
Enzymes [BR:
gab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
108476181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
108476181
NCBI-ProteinID:
XP_052887097
LinkDB
All DBs
Position
7:complement(100729367..100731274)
Genome browser
AA seq
368 aa
AA seq
DB search
MTGIGIGNVEVGALITIILIFASTVSSQSSPEIPEDKSQVSAWFDANVMPASERTGSIDA
VLAQAETEPTVVKVVQGGGGDFETITEAIESVPEGNDKRVIISIGPGSYKEKIKIERTKP
FITFHGDPNGMPTLTFDGTAHDYGTVDSASLIVESDFFMAVNLIIENSAPRPDGKTVGAQ
AVALRISGDEAAFYNCKIIGFQDTLCDDRGNHFFMNCYIHGTVDFIFGSGKSLYLNTELY
VDGDTGLTVITAQARESQEENTGYSFVHCTITGTAQGAYLGRAWKTSPKVVYAYTDMSEV
INPEGWSHNLQPERAQTVFYGEYKNTGPGADQAGRVPFAVQLTENVAQEFLNLGFIEGSR
WLLPPPNI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaataggaatcggaaacgttgaagttggtgcactaattaccataattctcata
tttgcttcaactgtttcatcgcaaagttcaccagagatacccgaagataaatcacaagtg
agtgcgtggtttgacgccaacgtcatgcctgcatctgagagaactggcagcatagacgct
gtccttgcgcaggccgaaactgaacctacagtggtaaaagtggtgcaaggtggcggtgga
gattttgaaaccataaccgaagccattgagagcgttcccgaagggaacgacaaacgcgtg
attatatcgattggacctggttcttataaagagaaaatcaaaattgaacgaactaaacca
ttcattacattccatggggatcccaacgggatgccaactttgacattcgatggtaccgca
catgattatggaacagtagacagtgcctcccttattgtggagtctgatttcttcatggct
gttaatctcattatagaaaattctgctccgagaccagacgggaaaacggtcggagcacaa
gctgttgccctgagaatctctggcgatgaggcggctttctataactgcaagatcattggt
ttccaagatacattatgtgatgacaggggaaaccatttctttatgaactgctatattcat
ggcactgttgatttcattttcggaagtggaaagtctttgtatctgaacacagaattatac
gtagacggggatacgggactaacagtaatcacagcacaagcaagggaaagtcaagaggag
aacactggttattcttttgtgcattgcaccattactggaacagcgcaaggtgcatatctg
ggtagagcttggaagaccagtccaaaagttgtttatgcctatactgatatgagcgaagtc
atcaatcccgagggatggtctcataatttacaacctgagcgcgcccaaactgttttctac
ggagaatacaagaacacagggccaggagctgatcaagctgggcgagtgccattcgctgta
cagctaactgagaacgttgcccaagaattcttaaatcttggcttcattgagggtagcaga
tggttgcttccgccaccaaatatctaa
DBGET
integrated database retrieval system
