Gossypium arboreum (tree cotton): 108476207
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Entry
108476207 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: regulatory-associated protein of TOR 1-like
KO
K07204
regulatory associated protein of mTOR
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108476207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108476207
Membrane trafficking [BR:
gab04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
108476207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
HEAT
Beta-prop_EML
PEP5_VPS11_N
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
PROPPIN
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
108476207
NCBI-ProteinID:
XP_052882068
LinkDB
All DBs
Position
3:complement(138812400..138824212)
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AA seq
1355 aa
AA seq
DB search
MALGDLMTSRFSQLSLAVSNHVIDGNVSSGGYHEDDVAYADLMSQRRDLDAVSTSSYANA
VTSTATVPTTMAYLPQTVVLCELRHAAFEASTPTGPSDSGLVSKWRPKDRMKTGCVALVL
CLNISVDPPDVIKISPCPRMECWTDPFSMAPQKALETIGKNLRDQYERWQPKARSKVELD
PTVDEVKKLCNTCRRYAKSERVLFHYNGHGVPKPTANGEIWLFNKSYTQYIPLPISDLDS
WLKTPSIYVFDCSAAGMVVNAFIELLDCGTSNYPGSSRDCILLAACEAHETLPQSSEFPA
DVFTSCLTTPIKMALRWFCTRSLLHESLDSSLIDKIPGRQNDRKTLLGELNWIFTAVTDT
IAWNVLPHDLFRRLFRQDLLVASLFRNFXLAERIMRSANCSPISYPMFPPTHQHYMWDAW
DMAAEICLSQLPSLVEDPNAEFQPSSFFTEQLIAFEVWLDHGSEHKKPPEQLPIVLQVLL
SQCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILAL
DKSCQVDLVKDGGHVYFIRFLNSAEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLIQV
CLKQLHGFTQNEAQTEPLLLQWLCLCLGKLWEDFTEAQTIGLQADVPGICAPLLSEPQPE
VRASAVYALATLLDVGFDSFRDGIGGDEECDDVEKNRAEMIIIKSLLNVVSDGSPLVRAE
VAVALAHFAFGHKQHLKSIAAAYWKPQPNSLLNSLPSLANLKGTGSGNIVSSQIGPLTAM
VRDGRVSTSSPLATAGIMHGSPLSDDSSQLSDSGILNDGVSNGEVNHSRPKPLDNAMYSQ
CVLAMFTLARDPSPRVASLGRRVLSIIGIEQVTKSVKPAGNSAWPSDPANSSSTPSISGL
ARSSSWLDINGGHMPLTFRTPPVSPPRQNYLAGIRRVCSLDFRPHLMNSPDSGLADPLLG
STSGSERSLLPQSTIYNFSCGHFSKSLLTASDDSEELLAKREEQERFALEHIAKCQHSSV
SKLNNNSQIASWDAKFETGTRTALLQPFSPIVIAADENERIRVWNYEEATLLNGFDNHDF
PEKGISKLCLLNELDDSLLLVASSDGNIRIWKDYTLRGKQKHVTAFSSIQGHKPGVRSLN
AVVDWQQQSGYLYASGEISSIMLWDLDKEQLVNSIPSSSDCSVSALASSQVHAGQFAAGF
VDGSVRLYDIRTPDMLVRTTRPHTQQVARVVGIGFQPGLDQGKIVSASQAGDIQFLDIRS
QRDTELTIDAHRGSLTALAVHRHAPIIASGSAKQLIKVFSLKGEQLGTIRYQHTFMAQKI
GSVSCLTFHPYQVLLAAGAADACVSIYADDNSHTR
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggtgatctgatgacgtcacgattttcgcaattgtcgttggcggtatcgaat
catgtcatcgatggtaacgtcagcagtggcggctaccatgaggacgatgttgcttatgct
gacttgatgtctcagaggagggatttagatgctgtatcaactagcagttacgccaatgcc
gttacttccacggccactgtgcctacgaccatggcttacttgccgcaaactgttgtttta
tgcgagcttcggcatgctgcctttgaagcttccacgccaactggaccctctgatagtggc
cttgtttccaaatggcgccccaaggaccgaatgaagacaggatgtgtggccctagtttta
tgtttaaatatcagtgttgatccacctgatgtaataaaaatatctccttgcccaagaatg
gagtgctggactgaccctttttctatggcaccacaaaaagctctggaaactattgggaaa
aacttgagagatcaatatgagaggtggcagcccaaggctcgcagtaaggttgaacttgat
cctacagtggatgaagtgaagaaactttgtaatacatgtcgcagatatgccaagtcagag
agagttttatttcattacaatggacatggtgttccaaagccaactgcaaatggtgaaatc
tggctgtttaataagagttatacacagtatattcccttgcctatcagcgatcttgattct
tggttaaaaacaccttctatatatgtttttgattgctctgctgcaggaatggttgttaat
gccttcattgagcttcttgactgtggcacttctaactaccctggatcttcaagagactgc
attcttctggctgcatgtgaagcacatgagactcttcctcaaagttctgaatttcctgct
gatgtgtttacttcttgtcttactacacctatcaaaatggcattgagatggttttgtaca
cgttcattgcttcacgagtctcttgactcttcacttattgataaaattcctggccgtcaa
aatgaccgtaaaacacttctaggggaattgaattggatatttactgcagtgactgacaca
attgcttggaatgttctccctcatgaccttttccgaaggttgtttagacaggatttacta
gttgctagtttgttcagaaattttnttcttgccgagaggattatgcgctctgcaaattgt
tctccaatttcttacccaatgttcccaccaacccatcagcactatatgtgggatgcatgg
gacatggctgctgaaatttgcctttctcagcttccatcattggttgaggatcctaatgca
gagttccagccaagttcatttttcactgaacagctgatagcctttgaggtatggcttgac
catggatctgagcataaaaagccaccagagcaattgcctattgtgcttcaggttttgctt
agtcaatgtcatcgattccgtgctctagttcttcttggaagattccttgatatgggacca
tgggctgtagatctggccctttctgttggaatatttccttatgttctgaagctgttgcaa
acaaccactccagaactgcgtcaaatccttgtcttcatttggacaaaaattttggcactt
gataagtcatgtcaggttgatcttgtaaaggatggtggtcatgtttatttcattaggttt
cttaatagtgcagaggcatatcctgaacagcgtgcaatggctgcatttgttctggctgtc
attgtggatggtcatagacgaggccaggaagcctgtattgaagcagggttaatccaggtg
tgcttgaagcagcttcatggtttcacgcaaaatgaggcacaaactgaacccttattactt
cagtggctttgcctttgtcttggaaagctgtgggaggattttactgaggctcagacaatt
ggtctgcaggcagatgtgcctggaatatgtgctcctctactctctgagcctcagccagag
gttagagcttcagcggtttatgcattagctaccttgcttgatgttgggtttgactcgttt
agagatggtattggaggggatgaagaatgtgatgatgttgaaaagaatagagctgagatg
attataattaaaagccttttgaatgtcgtctctgatggaagccctcttgtccgggcagaa
gttgctgtagctctggcacactttgcctttggacataagcagcatctcaagtcaattgct
gctgcatattggaaacctcagcctaattccctgttgaattcattgccttcacttgctaat
ttaaagggcacaggaagtggaaatatagtttcttctcagattggtcctttaacagccatg
gttcgggatggaagggtatccactagcagtcctcttgctactgctggaatcatgcatgga
tctccattatccgatgattcatctcaactttctgattctggaatactgaatgatggtgtc
agtaatggggaagttaatcattcaagaccaaaacctttggacaatgcaatgtattcacag
tgtgtactggccatgtttactttagctagggatccatctccacgtgtagcaagtctagga
cggcgggttctttccattattggaattgaacaagtaacaaaatctgtgaagcccgctggt
aatagtgcctggcctagtgatcctgcaaattcctcatcaacccctagtatttctggatta
gctcgttcttcttcctggttggacattaatggaggtcatatgcctttaacatttagaact
cctcctgttagccctcctcgacaaaattacttggcaggaattcgtagggtttgctcttta
gacttcaggcctcacctgatgaattctccggactcaggattggctgacccacttctaggc
tctacttctggatcagagcgcagtttacttcctcagtcaacaatatataattttagttgt
ggccacttctcgaagtctctgcttactgcatcagatgacagtgaagaactactggccaaa
agagaagagcaggagagatttgcactggagcatattgctaagtgccagcactcatctgtt
agcaaacttaacaataatagtcaaattgctagctgggatgcaaaattcgagacaggtaca
agaactgccttgctgcaacctttctctcctattgtgattgcggcagatgagaatgaacgg
atcagggtatggaattatgaggaagccaccctcctcaatggttttgataatcatgatttt
ccggaaaagggaatatctaaactttgtcttttgaatgagcttgatgacagcttgttgctt
gttgcttcaagtgatggaaatatacggatttggaaagattatacactgagggggaaacaa
aaacacgttaccgcattttcttctatccaaggtcacaaacctggtgtgcggagtttgaat
gctgttgtggactggcaacagcagtctggatatctctatgcatctggagagatatcatcc
atcatgctttgggacttggataaggagcaacttgttaattcaataccatcatcctcagat
tgtagtgtctcggcattggcttcttctcaagtccatgctggtcaatttgcagctggtttt
gtggatggttctgttagactatatgacatccggacacccgacatgctggttcgcacaacc
aggccgcatactcaacaagtagcaagagttgtgggtatcggctttcaacccggacttgat
caaggaaagattgttagtgcatcccaggctggtgatattcagttcctcgatattagaagt
caaagagatacggaacttacaatcgatgctcaccgaggatcacttacagctttagctgtt
cacagacatgccccgataattgccagtggttcagcaaaacagctaatcaaagttttcagt
ctaaaaggcgaacaactcggcaccattagataccaacataccttcatggcccagaagatt
ggttctgtaagctgccttaccttccatccctaccaagtgttactcgctgccggtgccgct
gatgcctgcgtttcaatctatgccgatgacaactctcatacaagataa
DBGET
integrated database retrieval system
