Gossypium arboreum (tree cotton): 108476250
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Entry
108476250 CDS
T05776
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108476250
03012 Translation factors [BR:
gab03012
]
108476250
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108476250
Translation factors [BR:
gab03012
]
Eukaryotic type
Initiation factors
eIF-3
108476250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_IFT122_1st
RRM_1
WD40_WDHD1_1st
ANAPC4_WD40
Tricorn_2nd
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
108476250
NCBI-ProteinID:
XP_017633891
LinkDB
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Position
3:complement(110516..114699)
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AA seq
716 aa
AA seq
DB search
MAAEVMLMNEIEATAAQMGIDMNIDFSSIQLPPGENCGIISDDDDVYHDDQLEFDSGFGN
VIVVDNLPVVPREKFEKLEGVIRKIYSQIGVIKEDGLWMPVDPETKKTLGYCFIEYNTPQ
EAELAKEKTHGYKLDRAHIFAVNMFDDFDKYMKVPDEWAPPEIKPYTPGENLQKWLADEK
ARDQFVIRAGTDTEVLWNDARQSKTEPVYKRTFWTESFVQWSPMGTYLATVHRQGAAVWG
GANTFNRLMRYGHPQVKLIDFSPGEKFLVTYSSHEPSNPRDANRVVINIFDVRTGKVMRD
FKGSADEFAVGGAGGVAGNSWPVFRWGGGKEDKYFAKLGKNMISVYETETFSLIDKKSLK
VENVMDFSWSPTDPIIALFVPELGGGNQPARVSLVQMPGKEELRQKNLFSISDCKMYWQS
NGDYLAVKADRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFA
VIHGDNPRPDVSFYSMRSTHNLGRVAKLTTLKGKQANALFWSPGGRFIVLAGLKGFNGQL
EFFNVDELETMATAEHFMATDVEWDPTGRYVATSVTSVHEMENGFNIWSFNGKLLYRILK
DHFFQFLWRPRPPSFLTPEKEEEIARNLKKYSKKYEAEDQDVSMLLSEQDREKRRMLKEE
WEKWVSEWRRAQEEEKLERQKLRDGEASDEEEEYEAKEVEVEEVLDVSEEVLSFEE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaggtgatgctaatgaacgagatagaggcgacagcagcacaaatgggtatc
gatatgaatatagatttcagctccatccaacttcctcctggtgaaaactgtggcattatc
agtgacgatgatgatgtttaccacgatgaccaattagagtttgattccgggtttggaaac
gttatcgttgttgataatctccctgttgttcctcgtgaaaagtttgagaaactcgaggga
gttattcgaaaaatctatagtcagattggggtgattaaggaggatggcctttggatgcct
gttgatcctgagactaagaaaaccctaggttactgttttatagagtataatactcctcag
gaagctgagcttgctaaggagaagactcatgggtacaagctggatagagcacatattttt
gctgttaatatgtttgatgattttgataagtacatgaaagttccggatgaatgggctcca
cctgagattaaaccctacacaccaggggaaaatcttcaaaaatggcttgctgatgaaaag
gcacgagatcaatttgtaattcgtgctggtactgatactgaggttctatggaatgatgca
aggcagtctaaaactgagcctgtttacaaacgcactttctggactgagagttttgtgcag
tggtctcccatggggacatacttggcaacggtccacaggcaaggagctgcagtttgggga
ggtgccaacacctttaatcgtctaatgcgttatggccatcctcaggttaaacttattgat
ttttcccctggtgagaaatttttggtgacttacagcagtcatgaaccaagcaaccctcgt
gatgcaaatagggttgtgataaatatttttgacgtgagaactggaaaagtgatgagagat
tttaaaggaagcgcagacgaatttgcagttggaggagctggtggtgttgctggtaattct
tggcctgttttcaggtggggaggtggaaaggaggacaagtattttgccaaacttgggaaa
aatatgatatctgtttatgaaacagagacctttagtcttattgacaagaaatctttgaaa
gttgagaatgttatggacttcagttggtcaccaactgatcccattattgcactttttgtt
cctgaacttggaggtggaaaccaacctgctagggttagtctagttcaaatgcccgggaaa
gaggaattgagacagaaaaatcttttcagcatcagcgattgcaagatgtactggcaaagc
aatggcgattatcttgcggtgaaggctgatcgctatacaaaaacaaagaaaagtacgtac
accggctttgagctctttcgcatcaaagaaagggacattccaattgaagttttggaactt
gataataaaaatgataagataattgcatttgcttgggagcccaagggtcacaggtttgct
gttatacatggggataatccaaggcctgatgttagcttttactcaatgcgaagcactcac
aatttgggtcgagttgcaaagctcacaactctgaaaggcaagcaagcaaatgctcttttc
tggtcacctggtggtcgtttcatagtactcgctggattgaagggtttcaatggtcagttg
gaattcttcaatgttgatgagcttgaaactatggctactgctgaacattttatggcaaca
gatgttgaatgggatcccactggaaggtatgttgcaacttcagtgacttcggttcatgaa
atggaaaatggtttcaacatatggtcctttaatggcaagctactttatcggatactgaag
gatcatttcttccagttcttgtggcgtccaaggccaccatccttcttgacacctgagaag
gaggaagagattgcaaggaacttgaagaagtatagcaagaagtacgaggcagaggaccag
gatgtatcgatgttattgagcgagcaagatcgagagaagagaaggatgttgaaggaggaa
tgggaaaagtgggttagtgaatggaggcgggcacaagaggaagaaaaattggagaggcaa
aagttgagggatggagaagctagtgatgaagaagaagaatacgaggccaaagaagttgaa
gtagaggaagtgttggatgtgtcggaagaggtcctttcatttgaagagtga
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