Gossypium arboreum (tree cotton): 108476300
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Entry
108476300 CDS
T05776
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108476300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108476300
03051 Proteasome [BR:
gab03051
]
108476300
Membrane trafficking [BR:
gab04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
108476300
Proteasome [BR:
gab03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108476300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
Ubiquitin_2
Dsc3_N
UBA_NBR1_C
UBA_7
XPC-binding
Rad60-SLD_2
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
108476300
NCBI-ProteinID:
XP_017633960
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Position
3:complement(604051..609299)
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AA seq
547 aa
AA seq
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MGAEGDSSESRPVGNVGEKEEGVTVNIRCSNGTKFTVRTNLESTVGSFKALLAQNCDIPA
DQQRLIYKGRILKDDQTLQSYGLQADHTVHMVRGSAPSSSTPPSAATTNVATPNTTPGVT
LGVGSNDSAGLGASLFTGLNPLGSNGGFGLFESGLPEFEQVQQQLTQNPQVMREIMNTPA
IQSLMNNPELMRTLIMSNPQMREIIDRNPELGHILNDPSTLRQTLETARNPELMREMMRN
TDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGSNVDSPGSNPFAALLGNQGNSQA
RDSPNNTSTTGSETTPNTNPLPNPWSNNAGGGAAQTNTAARSNPATDARTPGVGGLGGLG
LPDMPPMLNGMPDASQLTQLLQNPAISQMMRSGASNPQYMNQIMNLNPQLRGMFDSNPQL
REMMQNPEVLRQMFSPETMQQMLTLQQSLLSQLNRQQSTQDSTQSSTTTGAPGTPSLDLL
MNMFGGLSAGSLSVPNQPNVPPEELYATQLSQLREMGFYDTEENIRALRATSGNVHATVE
RLLGNPQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcggaaggggattcgagtgagtcacgacccgttggcaatgtaggagaaaaagaa
gagggagtgacggttaatatccgctgctcgaacggtacaaaatttacggtgaggaccaat
cttgaatcaaccgttggatctttcaaagctcttttggctcagaattgtgatatcccagct
gatcagcaacgattgatttataaagggcgaatattgaaagatgaccaaacccttcaaagt
tatggtttgcaagctgatcatacggtccacatggtccgtggttccgccccgtcttcgtct
acacctccttctgcagctaccacaaatgttgcaactcctaatacaacacctggggtcacg
cttggtgttggttctaacgacagtgctggcctaggagcttcgttattcactggactcaat
ccactcggtagcaatggaggtttcggtttgtttgaatccggacttcctgaatttgaacaa
gtacagcaacagctaactcaaaatcctcaagtgatgagggaaataatgaatacacctgct
attcaaagtttgatgaataacccggagttaatgcgcactttgattatgagcaatccccaa
atgcgtgaaataattgatcggaaccctgaacttgggcatatacttaacgatcctagcact
cttcggcaaacgttggaaactgcaaggaaccctgaactcatgcgtgaaatgatgcgaaat
actgatagggccatgagtaatattgaatcctctcctgagggatttaacatgcttaggcgt
atgtatgaaaacgttcaggagccatttttgaatgctacaactatggctggaagtaatgta
gatagtccaggttcgaaccctttcgcagccctattgggcaatcaaggtaattctcaagct
agagattcaccaaacaacacttctactactggttccgaaactaccccaaatacaaatcct
cttcctaacccttggagcaacaatgctggtggtggggcagcccagaccaatactgctgca
aggtcaaatcctgctacggatgctaggacacccggtgttggtggtctaggagggcttggg
ctaccagacatgccgcccatgctgaatggaatgccagatgcttctcagttgacacaattg
ttgcaaaacccagctatatcacaaatgatgcgtagtggagcatctaatccccagtatatg
aatcagattatgaatctcaacccccaactgcgtggaatgtttgactcgaaccctcaattg
agagaaatgatgcaaaaccctgaagtacttcgtcagatgttttcccctgagacaatgcag
caaatgctaactttacaacagtcacttctgtctcagctcaatcggcagcaatctactcag
gattcaacgcagagcagtactactacaggagcacctggtactcctagtctggacttgttg
atgaatatgttcggtggtctcagtgccggtagccttagtgttcccaaccaacccaatgtt
cccccagaagaactgtatgctacacaattatcacaactccgagaaatgggtttctacgac
accgaagagaacattagagcacttcgtgctacttctggaaacgtccacgccacagttgag
agacttcttggaaatccgcagtaa
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