Gossypium arboreum (tree cotton): 108476400
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Entry
108476400 CDS
T05776
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108476400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108476400
Spliceosome [BR:
gab03041
]
Complex C
Other components
Step II factors
108476400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
CrtC
Tudor_3
Motif
Other DBs
NCBI-GeneID:
108476400
NCBI-ProteinID:
XP_017634103
UniProt:
A0A0B0NGD1
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Position
3:complement(133856894..133860991)
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AA seq
541 aa
AA seq
DB search
MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIFQAEKYRKGACENCGAMTHDAKSCMERPRKKGAKW
TNMHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARRKYLKEQQLKKLE
EKNSKNEGEGEGEGGEISDEEDDDDALKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTV
RNLRIREDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYEGDNQYRMSGQALEF
KQLNIHAWEAFDKGQDIHMQAAPSQAELLFKNYKVIKEKLKSKTKDTIMEKYGNAATEEE
IPMELLLGQSERQVEYDRAGRIIKGMETSLPKSKYEEDVFINNHTSVWGSWWKDHQWGYK
CCKQTIRNSYCTGAAGIEAAEAATDLMKSNIARKASSEDAPAPAREKKHVTWGTDVPEDL
VLDEKLLTEALKKEEEKRREEKDERKRKYNVRWNDEVTAEEMEAYRMKRVHHDDPMKDFL
N
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagtggcgtttaaatcaagagaggatcaccgaaaacagctggaatta
gaggaagctcgaaaggcggggcttgctccggctgaggttgacgaggatggaaaagaaatt
aaccctcatattcctcagtatatgtcatcagcaccttggtatcttaacgctgaaagacct
agtttgaagcatcaacggaagtggaaatctgatcccaattataccaaatcttggtacgat
agaggcgcgaagatatttcaagctgaaaaatatcgaaaaggagcctgcgagaactgtgga
gccatgacacatgatgcaaagtcatgcatggagaggcctcgtaaaaagggcgcaaaatgg
acgaacatgcacattgcacctgatgaaaagatagagactttcgaactggattatgatggc
aagcgtgatagatggaatggttatgatgcatctacatatgctcgtgtcattgaaaggtat
gaggcaagggatgaggctagaaggaagtatctgaaagaacagcagctgaaaaagttggag
gagaaaaatagtaaaaacgagggagagggagagggggagggaggagagattagtgacgaa
gaagatgatgatgatgctctgaaggttgatgaagcgaaggttgatgagagcaaacagatg
gactttgctaaggttgagaagcgtgttcgtaccactggcggagggagcacgggaactgtg
aggaacttgcgtattcgggaagacacagcaaaatatcttttgaatcttgatgtcaattcc
gcatattacgatcccaaaactcgatcaatgcgtgaagatccacttcctgatgctgatcct
aatgagaagttctatgaaggtgataatcaatataggatgagtgggcaagcattggagttc
aagcagctcaatattcatgcgtgggaagcatttgataaaggtcaagatattcacatgcag
gctgctccatcccaagctgaactcctcttcaagaattacaaggtcattaaagagaagttg
aaatcaaagacgaaagataccataatggaaaagtatggcaatgcagcgactgaagaagag
atacccatggagcttctcttagggcaaagtgagaggcaggtcgaatatgatcgtgctgga
aggattattaagggaatggaaacttctcttccaaaaagtaagtatgaagaagatgttttc
attaataatcacactagtgtctggggctcttggtggaaggatcaccaatgggggtacaag
tgttgcaagcagaccattcgcaatagttactgtactggtgcagccggtattgaagctgca
gaagcagccacagacttgatgaagtcaaacattgctcgtaaagcatcctccgaagatgcc
ccagctcctgcacgggagaagaaacacgttacttggggaactgatgttcctgaggacttg
gttctcgatgaaaaacttctcactgaggctcttaagaaggaggaggagaagaggagagag
gagaaagatgaaagaaaacggaagtataatgtcagatggaatgatgaggtaactgctgag
gaaatggaggcatatcggatgaaaagggtacaccacgatgatccaatgaaggatttctta
aattga
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