Gossypium arboreum (tree cotton): 108476498
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Entry
108476498 CDS
T05776
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic-like
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00300
Lysine biosynthesis
gab00470
D-Amino acid metabolism
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
gab01230
Biosynthesis of amino acids
Module
gab_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
108476498
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
108476498
Enzymes [BR:
gab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
108476498
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
108476498
NCBI-ProteinID:
XP_017634196
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All DBs
Position
12:complement(4588418..4592672)
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AA seq
488 aa
AA seq
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MAATHLLSHSPFLPKTLNHSLTQNPFSKSPILPLKPSKNLFNQPSLSLSLKAVLSQNPAK
TLNPTFQHCFTKSPDGFLYCEDTKVQDVMEKVEKRPFYLYSKPQITRNVEAYKEALEGLK
NSIIGYAIKANNNFKILRHLRMLGCGAVLVSSNELKLALRAGFDPTKCIFNGNGKILEDL
VLAAQEGVFVNVDSEFDLENIVAAARIAGRKVNVLLRINPDVDPQVHPYVATGNKNSKFG
IRNEKLQWFLDAVKGHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRAQGFEV
DYLNIGGGLGIDYYHSGAVLPTPRDLIDTVRELVHSRNLNLIIEPGRSLIANTCCFVNRV
TGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPAPPAAEVSTFDVVGPVCESADF
LGKERELPTPAKGTGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSVTKIRHGETFED
HMRFFEGL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggctactcatcttctctctcactccccatttcttcccaaaaccctaaaccactca
ttaacccagaacccattttccaaatcccccattttgcccctcaagccctccaagaatctc
ttcaaccaaccctccctctccctctctctcaaagctgtcctctctcagaaccctgctaaa
accctcaaccccacttttcaacactgcttcactaaatccccagatgggtttctctactgt
gaggataccaaggtccaggatgtcatggaaaaggtcgaaaagaggccgttttatttgtat
agtaagcctcagattactaggaatgtggaagcttataaagaggcccttgaaggcttgaag
aattccattattgggtacgccatcaaggcgaataacaatttcaagattttgcggcatttg
aggatgttgggttgcggtgctgtgcttgttagtagcaatgaactcaagttggctcttcgt
gccggcttcgatccaactaagtgtatctttaatgggaatgggaagatcttggaagatttg
gtactagctgcccaagaaggtgtttttgtcaatgtggatagtgaatttgatctggagaat
attgtagctgctgcaagaattgctggcagaaaggttaatgttttgcttcggatcaaccct
gatgtagatcctcaggtccacccatatgttgctacggggaacaagaactccaaatttggt
attaggaacgagaagctgcagtggtttctggatgctgtaaagggacatcctaatgagctg
aaacttgtaggggcccactgtcatcttggttcaaccattaccaaggtggatatatttagg
gatgctgctgttctcatggtcaactacattgatgaaattcgtgcccaaggttttgaggtt
gattatttgaacattggaggcggtttggggatagattactaccacagtggtgccgtcctt
cccacacctagagatctcattgacactgtaagagaattggtacattcaaggaatcttaat
ctcatcattgaaccaggaagatcactcattgcaaatacttgctgctttgtcaatcgtgtc
actggagtcaaaactaatggaacaaaaaatttcattgtgattgatggtagtatggctgaa
ctcatccgtcctagcctttatgatgcttatcaacatatagagctggtttctcctgctcct
cctgctgctgaggtttctactttcgacgttgttggccctgtttgtgaatctgcagatttc
ttaggaaaggagagagaacttcccaccccagctaaggggactggcctggtcgtacatgat
gcaggtgcttactgcatgagcatggcatcaacttacaatctcaagatgcgccctcccgag
tactgggttgaagaagatggatcagtgaccaagattcgacatggggaaacatttgaagac
cacatgcggttttttgaaggtctttaa
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