Gossypium arboreum (tree cotton): 108476499
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Entry
108476499 CDS
T05776
Name
(RefSeq) ATP-dependent DNA helicase DDM1 isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108476499
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108476499
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
AAA_19
Motif
Other DBs
NCBI-GeneID:
108476499
NCBI-ProteinID:
XP_017634197
UniProt:
A0A0B0MBI1
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Position
12:complement(16180762..16186008)
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AA seq
752 aa
AA seq
DB search
MRAENGKGNGVSAESPTSVLEDEEKCKEEITKLEEESVLDAKNGDTSLLSEAMVEEEEKL
REARLKEEIKQGEPEESVHLNDTQFTRLDELLTQTQMYSEFLLEKMEDITFSVPKPEAAQ
TKRGRGSKRRAANQYNNRKVKRAVAAMLTRSKEGETENVEDKNLTEEEKNEKEQGELVPL
LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGMDGPYLII
APLSTLSNWMNEIARFTPSINAIIYHGTQKERDELRRKHMPKVIGPSFPIVVTSYEMAMS
DAKKFLRHYEWKYVVVDEGHRLKNFQCKLVKELKHLRAGNKLLLTGTPLQNNLAELWSLL
NFILPDIFQSHEEFESWFDFSGKSNGEVSKEEMEEKRRAQVVAKLHAILRPFLLRRMKSD
VEQMLPRKKEIILYASLTEYQRNFQDHLLNKTLESHLQDRGDSGRGMKGKLNNLMIQLRK
NCNHPDLLEAAFDGSYFYPPVEQIVEQCGKFQLLERLLTRLFERKHKVLIFSQWTKVLDI
MDYYFSEKGFNVCRIDGSVKLEERRRQIQEFNDVNSDYRIFILSTRAGGLGINLTAADTC
ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVECRILKRAYSKLKLEHVVIGK
GQFHQERKQSNDLVEEDLLALLRDEETAEDKMIQTDISDEDLERILDRSDLIADTSDKEK
TQASADAVPLKGPGWEVVLPTGTGGMLSTLNS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagggctgagaatggaaagggaaatggcgtttctgctgaatcaccgacttcggttctc
gaagatgaggagaagtgcaaagaggaaatcactaagttggaggaggaatcagttctagac
gccaaaaatggagatacttctcttttatcagaggctatggtcgaggaagaagagaagcta
agggaagctcggttgaaagaggagataaaacaaggggagcctgaagagtcagtgcacttg
aatgatactcagtttactagattggatgagcttttgacccaaacccagatgtactcagag
tttttgcttgaaaagatggaggacataacatttagtgtacctaagcctgaagctgctcag
acaaagagaggtcgaggttcaaaaagaagagccgctaaccagtacaacaataggaaggtc
aagagggcagttgcagcaatgcttacaaggtctaaagagggagagactgagaacgttgaa
gataaaaacttgactgaggaggaaaaaaatgagaaggagcagggagaacttgtaccattg
ttgactggtggaaaattgaagtcttatcagcttaaaggtgtaaaatggttgatctcctta
tggcaaaatgggctaaatgggatccttgcagatcagatgggtcttggaaagacaattcaa
acgattgcttttcttgcacatttgaaaggaaatgggatggatgggccttatttgattatt
gctcctttgtcgactctttctaattggatgaatgagattgcaaggtttacgccctcaatt
aatgccattatttatcatggaactcagaaagaaagggatgagcttcgtaggaagcacatg
cctaaagtaattggccccagttttccaatagttgttacttcttatgagatggcaatgagt
gatgcaaagaaatttttgaggcattatgagtggaaatatgttgtggttgatgaggggcac
agattgaaaaacttccaatgcaaattagtgaaagaattgaaacacttacgtgctggcaat
aagctcctcttaactggaacacctctgcagaacaatttggcagagctatggtcattgtta
aatttcattttgcctgatatttttcaatctcatgaagaatttgagtcatggtttgatttt
tcgggaaaaagtaatggtgaggtgtcaaaggaagaaatggaagagaaacgaagggctcaa
gtggtagctaaactccatgctatattgcgcccctttctccttcgaagaatgaaatctgat
gtggaacagatgctccctcgtaaaaaagagatcatattatatgcttcgctgactgagtac
caaaggaatttccaagatcatttgcttaataaaactttggaatcacatctacaagatagg
ggtgactcagggcgtggtatgaaagggaagcttaacaatttgatgattcagcttcggaag
aattgcaaccatccagatctcctagaagctgcctttgatggatcatatttttatccacct
gtagagcagattgtcgaacagtgtgggaaatttcaattgcttgaacggttgttgactcgg
ttatttgagcgtaaacacaaggttctcatctttagccagtggacaaaggttctggatata
atggattactattttagtgaaaagggatttaatgtttgtaggattgatggtagtgtgaaa
ttagaagaaaggagaagacagatccaggagttcaatgatgtgaacagtgactataggata
tttattctcagcacaagggcaggaggtctgggtatcaacctgactgcagctgatacgtgt
atactttatgatagtgattggaacccacaaatggatttgcaagccatggatagatgtcat
cgcattggacaaaccaaacctgttcatgtttacagacttgcaacagcacaatctgttgag
tgccgcattttgaaaagagcttatagtaagttgaagttagaacatgtggtgattgggaaa
gggcagttccaccaagaacggaagcagagtaatgatcttgttgaggaagatctacttgca
ctactccgggatgaagaaactgctgaggacaagatgattcagacagatatcagtgatgag
gatcttgagaggattcttgatcgcagcgaccttattgctgatactagtgataaagagaag
acccaggctagtgctgatgcagttcccctcaaaggccctggttgggaggttgtgctacct
actggtactggaggcatgctctcaacgctgaatagttaa
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