Gossypium arboreum (tree cotton): 108476505
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Entry
108476505 CDS
T05776
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108476505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gab03032
]
108476505
03400 DNA repair and recombination proteins [BR:
gab03400
]
108476505
DNA replication proteins [BR:
gab03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
108476505
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
108476505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
108476505
NCBI-ProteinID:
XP_017634209
LinkDB
All DBs
Position
12:complement(94740742..94746712)
Genome browser
AA seq
1273 aa
AA seq
DB search
MLESDTPSKTFLGVRFCLYGFDPVNEHNVRVKLINGGGVGVGQYSQNCTHVIVDKIVYDD
PVCVAVRNDGKTVVTGLWVDHSFDIGMPVDATSIMYRPLRDLNGIPGAKSLIICLTGYQR
QDRDDIMTMVGLMGAQFSKPLVASKVTHLICYKFEGEKYELAKKIKKIKLINHRWLEDCL
RDWELLSEANYSKSGYELEVMEAEAKDSDEEAEETTLKHSGQRSLNRSPHSLKAGMLSSG
ELLSTVEVATSTIPGHSPNTKEVLVTPGKSHLGTSFNDVNDPELNSFQNSGLRNGSSTKL
AQPGNRGSNSTNMDSNLASTSKSPSLSNEMFTAISYSRKTPRNATPPNLSGEVSGNISGS
PQAMKIKDVSGISSSKIQQPEERICASFVRSPRKGSDLCHGEDSAGILPQKRALELSGSS
SKSQKMSYNAKGSIKGSALDTVQLEPTSSVGDQLQINDYPVNETGYPNVLHSSCAGNVTT
KLSTDLFSSKSVTPDDRQNGRDEKSPNMSSRGYRGSTLAGKLDMQNENAYEKSPQMSFKG
LRESTSVSRSNIGDYSLELLQVVGEPGDLQNKQQDVQVPSLDRKLGKDNSHSPSKLEVLE
GGNDESVTKSVSNKQRDVQVPSLDGKLGKDNVDSPSNLDVVEGGNDKSVTKPITKKKLAK
KTLGSRPKLSNIANRKGSIYSSKIASDNHSTISMDGDNERAGHKSASELETCPPTINLDA
AKDVEKVTKCQNIGTSKTQFMDDETQAPDEEDDNGSKKVTGVEKSELVEVMHKADMLVEA
EHVRHDPKVAVHASPVASENGTNGTDPGRAVGSKNSEFGEPALKSGGLKKKTNKRKKQLS
GKARMKAVPSNSKNDLAGENTSVEKNVGDKDNEKENFMPHPDDKPSSANASSRVEISGAA
GKGDTVGLKEIARKSVGKSNNRTLKTKEKSQNVDSNMQPVEKVFNRVKIEPTCFILSGYR
QQRKEFQQVIKRLKGKFCRDSHQWSYQATHFIAPDPIRRTEKFFAAAASGRWILKPEFLS
ACNEAGKFLAEEPYEWHKNGLSEDGAINLEAPRKWRQLKERTGHGAFYGMRIIVYGECIA
PPLDTLKRVVKAGDGNILATCPPYTRFLKSGVDFAVVSPGMPRVDIWVQEFLKHEVPCVV
ADYLVEYVCKPGYSLEKHVLYDTHEWAEKSFTNLTTRAEEIVDDLTHESPGNSESNDITC
QVCGSGDREDVMLICGNESGSVGCGIGIHIDCCDPPLDNVPEEDWFCPKCNKSSINNTSS
KRRKKGTSKSKGK
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgctggaatccgatactccctcgaaaacgtttctcggcgttcgtttttgtctttacggc
ttcgatcccgttaacgagcataatgttcgagtaaagctaatcaacggtggcggcgtaggt
gtcggtcagtatagtcagaattgcactcatgtgattgttgataagattgtctacgatgat
cctgtatgtgttgctgttcgaaacgatggcaaaacagttgtcactgggttatgggttgat
catagttttgatattggaatgcctgttgatgctacttcgattatgtacagacctcttagg
gatttaaatggaattcctggtgctaaaagtttaattatatgcttgactggatatcaaagg
caagatcgagatgacattatgacgatggttggcttgatgggtgctcaattttctaagcct
ctggttgcaagcaaagttactcatctaatatgctataaatttgaaggggagaagtacgag
cttgctaagaaaatcaagaagatcaagcttatcaaccaccgctggttggaagattgttta
agagattgggagcttctttcagaagctaattacagcaagagtggctatgagttagaggtg
atggaagctgaagctaaagattctgacgaagaggctgaagaaactacattgaagcattct
ggacaaaggagtctgaataggagccctcatagtttgaaagctggaatgctcagttcaggc
gagttgctctccacagttgaagtggccacttccactatacccggacattcaccaaatact
aaggaagttttagtgacgcctggaaaatctcatttaggcacaagcttcaatgatgttaat
gaccctgagctcaattcttttcagaactcaggtctcaggaatggttcatctactaagcta
gctcaaccaggcaacagaggctcaaattctacaaatatggatagtaacttggcatctacc
tctaagagtccctcattatccaatgagatgttcactgctataagttactccaggaaaact
ccaagaaatgctacacctccaaatttatctggggaggtatcaggcaacattagtggctct
cctcaagctatgaaaattaaggatgtatcaggcatttcttcctctaaaatacagcaacca
gaggaaagaatctgtgcttcttttgttagatctccaaggaaaggaagcgatttgtgtcat
ggagaggactctgctggtatattgcctcagaaaagagctttggaactttctggtagtagc
tctaaatcacaaaagatgagttataatgcaaaaggttccataaaaggcagtgcattggat
actgtacagttggagccgacatcctcggtgggagatcagctacagattaatgactaccca
gtgaatgagactggttatccaaatgttttacatagctcatgtgctggcaatgtgactacc
aagttgtcaactgatctcttttcctctaaatctgtaactccagacgacagacagaatggt
agagatgagaagtcacccaatatgtcctctagagggtatagagggtccaccttggcaggc
aagctggatatgcaaaatgagaatgcttatgagaagtcaccccaaatgtccttcaagggg
ttaagagagtcaacctcagtaagcagatcaaatattggcgattacagtctagaactatta
caagtggttggagagccaggtgacctgcagaataagcagcaagatgttcaggttccttca
cttgatagaaagctggggaaggataattcccatagcccttctaagttggaagtgcttgaa
ggtggaaatgatgaatcagtgacaaaatcagttagcaataagcagcgagatgttcaggtt
ccttcacttgatggaaagctggggaaggacaatgtcgacagcccttctaacttggatgtg
gttgaaggaggaaatgataagtctgtgacaaaaccaattaccaagaagaagcttgcaaaa
aagaccttaggttctcgaccaaagctaagtaacattgctaacagaaaaggttctatttac
tcaagcaaaattgcttctgataatcattctacaatttccatggatggtgataatgaaaga
gcaggtcataagagtgccagtgagcttgagacatgccctccaactattaacctggatgca
gcaaaggatgttgaaaaagttacaaaatgtcagaatattggtactagtaagactcaattc
atggatgatgaaactcaagctccagatgaggaagatgacaatggttctaagaaggtgact
ggagtagagaagtctgagttggttgaagtgatgcataaagcagatatgttagtagaggca
gaacatgtcagacatgatcccaaagtggctgtacatgcgagtccagttgcctctgagaat
ggaacaaatggaactgatcctgggagggcagttgggagcaaaaattctgaatttggtgaa
ccagcgttaaagagtggtggcttgaaaaagaaaacaaacaaaaggaagaaacaactttct
ggtaaggccaggatgaaggctgttccttctaattccaaaaatgatttggctggggaaaat
accagtgtcgagaagaatgttggtgacaaagataatgaaaaggagaatttcatgccacat
cctgatgacaaaccaagcagtgctaatgcgtcttcaagagtggaaatctccggggctgct
ggcaagggtgacacagttggtctcaaggagattgctaggaaatcagttggtaaatccaat
aacagaacattgaagactaaggaaaaatctcagaatgttgattctaacatgcaaccagtc
gaaaaggttttcaatagagtgaaaattgagcctacatgttttatattgagtggctacaga
cagcagagaaaagaatttcagcaagtcattaagcgtttgaaaggaaagttttgtagagat
tctcatcagtggtcataccaggcaacacatttcattgcacctgatccaattcgtaggact
gaaaaattctttgctgctgctgcttctggaaggtggattcttaaacccgaatttttaagt
gcttgtaatgaggcaggaaagttcttggcagaggagccttatgaatggcacaaaaatggc
cttagtgaagatggtgcaataaacttagaggctccaaggaagtggcgtcagttaaaggag
agaacaggccatggagcattttatggaatgcgcattattgtgtatggagaatgcattgct
cctcctttggatactctgaagcgtgttgtgaaagccggggatggtaacattttagcaact
tgtcccccttacaccagattcctcaaatctggtgttgattttgcagttgttagccctggc
atgccacgtgttgatatctgggttcaagagtttttgaaacacgaggtaccctgtgttgtt
gctgactacctagtggaatacgtctgtaaacccggttactccctggagaaacatgtccta
tacgacactcatgaatgggcagaaaaatcattcactaacttgacaactcgagctgaggaa
atcgtcgatgacttgactcatgaatcaccaggtaactcggagagtaatgatataacatgc
caagtttgcggctctggcgacagagaagatgtcatgctgatctgcggcaatgaaagtggt
tccgtaggttgtggaatcggcattcacattgattgttgcgatcccccgcttgacaatgtt
ccggaggaggactggttttgcccgaaatgtaacaaaagcagcataaacaacacgtcttcc
aaaagaagaaaaaagggaacgtcaaagtcaaagggtaagtag
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integrated database retrieval system
