Gossypium arboreum (tree cotton): 108476539
Help
Entry
108476539 CDS
T05776
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108476539
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Meiosis-specific proteins
Others
108476539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_14
AAA_27
Motif
Other DBs
NCBI-GeneID:
108476539
NCBI-ProteinID:
XP_017634256
LinkDB
All DBs
Position
12:complement(114340544..114349829)
Genome browser
AA seq
792 aa
AA seq
DB search
MEDDGGERSSFVIGLIENRAKEVGMAAFDLRSASLHLSQYIETSISYQNTKTLLHFYDPV
VIIVPPNKLAPEGMVGVSELVDRFYASVKKVVMARGCFDDTKGAMLIKNLAAREPSALGL
DTYYKQYYLCLASASAAIKWIEAEKGVIITSHSLAVTFNGSFDHMNIDTTSVHNLEIVEP
LHSALWGTSSKKRSLFHMLKTTKTIGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKITNEVLGADDAKKSQMLISSIILLKTALDAL
PLLSKVLKDAQCFILANVYKSVCENEKYADIRKRIGEVIDENVLHARVPFIARTQQCFAV
KAGIDGLLDIARRSFCDTSEAIHNLANKYREEYKLPNLKLPFNNRRGFYFSIPRKDIQGK
LPSKFIQVVKHGNNVHCSTLELASLNVRNKSAAGECYVRTEVCLEALVDAIREDILMFTL
LAEVLCLLDMIVNSFAHTISTKPVDRYTRPEFTDNGPLAIDAGRHPILESIHSDFVPNSI
FISEASNMVIVMGPNMSGKSTYLQQVCLIIILAQIGCYVPAHFATIRVVDRIFTRMGTMD
NLESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGLAIAWSCCEHLLSLNAY
TIFATHMENLSKLATIYPNVKILHFYVDIRNSHLDFKFRLNDGPKHVAHYGLLLAEVAGL
PSSVIETARSITSRITEKEVNEMEVNCLNHNQIMMAYHAAQRLICLKYSNQKEDAIRQAL
HLLKESYIDGKL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatggaggagaaaggtcaagcttcgtgatcggtctcattgaaaacagagct
aaagaggttggaatggctgccttcgacttaagatcagcttcactgcatctttctcaatac
attgaaaccagtatctcatatcaaaatacaaaaacattgctgcatttctatgatcccgtg
gtgatcattgttcctcctaacaaactagctcctgaaggtatggtgggagtatcagaactg
gtggatcggttttacgcttcagtcaagaaggttgtaatggctcgtggttgctttgatgac
accaagggtgcaatgctgattaagaatctagcagccagagagccttcagcccttggtctg
gatacatactacaaacaatattatctttgcttggcttctgcttctgctgcaatcaagtgg
attgaagcagagaaaggtgtcattatcacaagccattcattagcggtcacatttaatgga
tcatttgaccacatgaacattgatactacgagtgtccataacttggaaattgttgaacca
cttcattctgcactttggggtacaagcagcaagaaaagaagtttgttccacatgctcaag
acaacaaaaactattggagggactagacttcttcgcgctaatcttttgcagcctctaaaa
gatattgaaactatcaatactcgtctggattgtttggatgagttaatgagcaatgaacag
ctattttttggactctctcaggtcttgcgtaagttcccaaaggagactgatagggtactt
tgtcatttctgcttcaagccaaagaaaataacaaatgaagtcttaggtgcggacgatgct
aagaagagccaaatgttgatatcaagtattatccttctcaaaactgcattagatgccttg
ccattattgtccaaggttcttaaggatgcacaatgttttattcttgcaaacgtttacaag
tctgtatgtgaaaatgagaaatatgctgacattagaaagagaattggagaggtgattgat
gaaaatgtgcttcacgcacgtgttccttttattgctcgcacacagcagtgttttgctgtc
aaggctggaattgatggactattagatattgctcggagatctttttgtgatactagcgaa
gctatacataacctagcaaacaagtatcgggaagaatacaagctgccaaatctgaaactt
ccatttaacaatagacggggtttttactttagcattccccgtaaagatattcaaggaaag
cttcctagcaagttcattcaggttgtgaaacatgggaataatgtacattgctcgactttg
gaacttgcatctttgaatgtcagaaataaatctgcagctggagagtgctatgttagaacc
gaagtttgcttggaagccctagttgatgccataagggaggacatcctgatgttcacactt
cttgctgaagtcctgtgcctcttagatatgattgtgaattcgtttgctcatacaatatca
accaagcctgttgaccgatatactcggccagaatttactgataatggccctctagcaatt
gacgctggaagacaccccatcctagaaagcatacacagcgatttcgtgcccaacagcatc
tttatttctgaagcatcaaatatggtgattgtaatgggaccaaacatgagcgggaagagc
acttatcttcaacaagtgtgtctcataattattctagctcagattggctgctatgttccg
gcccacttcgcaacaattagagtagttgatcgtatatttacaaggatgggcacaatggat
aaccttgaatcaaactctagtacgtttatgacagagatgaaagagactgcattcatcatg
cagaatgtctcccaaaggagcttgattgttatggatgaacttgggagggctacttcttct
tctgatggtttggcaatagcatggagctgctgtgaacatttgctatccctcaacgcgtat
actatatttgctactcatatggagaatttgtcgaaactagcaaccatatatccaaatgtg
aaaattcttcacttctacgttgacattagaaacagccacctagactttaagttccgactc
aatgatggccctaagcacgtagcacactatggtcttctactagcagaagttgcagggtta
ccaagttcagtgattgaaacagctcgaagcataacatcaaggattacggagaaggaagta
aacgagatggaagtgaactgcctgaatcataatcaaataatgatggcctaccatgctgct
caacgactaatatgcttaaagtattcaaatcaaaaggaagacgctatccggcaggcattg
caccttctcaaggagagctatattgatggtaaactataa
DBGET
integrated database retrieval system