KEGG   Gossypium arboreum (tree cotton): 108476539
Entry
108476539         CDS       T05776                                 
Name
(RefSeq) DNA mismatch repair protein MSH4
  KO
K08740  DNA mismatch repair protein MSH4
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gab03036]
    108476539
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    108476539
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV AAA_14 AAA_27
Other DBs
NCBI-GeneID: 108476539
NCBI-ProteinID: XP_017634256
LinkDB
Position
12:complement(114340544..114349829)
AA seq 792 aa
MEDDGGERSSFVIGLIENRAKEVGMAAFDLRSASLHLSQYIETSISYQNTKTLLHFYDPV
VIIVPPNKLAPEGMVGVSELVDRFYASVKKVVMARGCFDDTKGAMLIKNLAAREPSALGL
DTYYKQYYLCLASASAAIKWIEAEKGVIITSHSLAVTFNGSFDHMNIDTTSVHNLEIVEP
LHSALWGTSSKKRSLFHMLKTTKTIGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKITNEVLGADDAKKSQMLISSIILLKTALDAL
PLLSKVLKDAQCFILANVYKSVCENEKYADIRKRIGEVIDENVLHARVPFIARTQQCFAV
KAGIDGLLDIARRSFCDTSEAIHNLANKYREEYKLPNLKLPFNNRRGFYFSIPRKDIQGK
LPSKFIQVVKHGNNVHCSTLELASLNVRNKSAAGECYVRTEVCLEALVDAIREDILMFTL
LAEVLCLLDMIVNSFAHTISTKPVDRYTRPEFTDNGPLAIDAGRHPILESIHSDFVPNSI
FISEASNMVIVMGPNMSGKSTYLQQVCLIIILAQIGCYVPAHFATIRVVDRIFTRMGTMD
NLESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGLAIAWSCCEHLLSLNAY
TIFATHMENLSKLATIYPNVKILHFYVDIRNSHLDFKFRLNDGPKHVAHYGLLLAEVAGL
PSSVIETARSITSRITEKEVNEMEVNCLNHNQIMMAYHAAQRLICLKYSNQKEDAIRQAL
HLLKESYIDGKL
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggaagacgatggaggagaaaggtcaagcttcgtgatcggtctcattgaaaacagagct
aaagaggttggaatggctgccttcgacttaagatcagcttcactgcatctttctcaatac
attgaaaccagtatctcatatcaaaatacaaaaacattgctgcatttctatgatcccgtg
gtgatcattgttcctcctaacaaactagctcctgaaggtatggtgggagtatcagaactg
gtggatcggttttacgcttcagtcaagaaggttgtaatggctcgtggttgctttgatgac
accaagggtgcaatgctgattaagaatctagcagccagagagccttcagcccttggtctg
gatacatactacaaacaatattatctttgcttggcttctgcttctgctgcaatcaagtgg
attgaagcagagaaaggtgtcattatcacaagccattcattagcggtcacatttaatgga
tcatttgaccacatgaacattgatactacgagtgtccataacttggaaattgttgaacca
cttcattctgcactttggggtacaagcagcaagaaaagaagtttgttccacatgctcaag
acaacaaaaactattggagggactagacttcttcgcgctaatcttttgcagcctctaaaa
gatattgaaactatcaatactcgtctggattgtttggatgagttaatgagcaatgaacag
ctattttttggactctctcaggtcttgcgtaagttcccaaaggagactgatagggtactt
tgtcatttctgcttcaagccaaagaaaataacaaatgaagtcttaggtgcggacgatgct
aagaagagccaaatgttgatatcaagtattatccttctcaaaactgcattagatgccttg
ccattattgtccaaggttcttaaggatgcacaatgttttattcttgcaaacgtttacaag
tctgtatgtgaaaatgagaaatatgctgacattagaaagagaattggagaggtgattgat
gaaaatgtgcttcacgcacgtgttccttttattgctcgcacacagcagtgttttgctgtc
aaggctggaattgatggactattagatattgctcggagatctttttgtgatactagcgaa
gctatacataacctagcaaacaagtatcgggaagaatacaagctgccaaatctgaaactt
ccatttaacaatagacggggtttttactttagcattccccgtaaagatattcaaggaaag
cttcctagcaagttcattcaggttgtgaaacatgggaataatgtacattgctcgactttg
gaacttgcatctttgaatgtcagaaataaatctgcagctggagagtgctatgttagaacc
gaagtttgcttggaagccctagttgatgccataagggaggacatcctgatgttcacactt
cttgctgaagtcctgtgcctcttagatatgattgtgaattcgtttgctcatacaatatca
accaagcctgttgaccgatatactcggccagaatttactgataatggccctctagcaatt
gacgctggaagacaccccatcctagaaagcatacacagcgatttcgtgcccaacagcatc
tttatttctgaagcatcaaatatggtgattgtaatgggaccaaacatgagcgggaagagc
acttatcttcaacaagtgtgtctcataattattctagctcagattggctgctatgttccg
gcccacttcgcaacaattagagtagttgatcgtatatttacaaggatgggcacaatggat
aaccttgaatcaaactctagtacgtttatgacagagatgaaagagactgcattcatcatg
cagaatgtctcccaaaggagcttgattgttatggatgaacttgggagggctacttcttct
tctgatggtttggcaatagcatggagctgctgtgaacatttgctatccctcaacgcgtat
actatatttgctactcatatggagaatttgtcgaaactagcaaccatatatccaaatgtg
aaaattcttcacttctacgttgacattagaaacagccacctagactttaagttccgactc
aatgatggccctaagcacgtagcacactatggtcttctactagcagaagttgcagggtta
ccaagttcagtgattgaaacagctcgaagcataacatcaaggattacggagaaggaagta
aacgagatggaagtgaactgcctgaatcataatcaaataatgatggcctaccatgctgct
caacgactaatatgcttaaagtattcaaatcaaaaggaagacgctatccggcaggcattg
caccttctcaaggagagctatattgatggtaaactataa

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