KEGG   Gossypium arboreum (tree cotton): 108476631
Entry
108476631         CDS       T05776                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gab04812]
    108476631
Cytoskeleton proteins [BR:gab04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     108476631
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_SCAP Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IFT140_1st eIF2A WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_RIG_1st Beta-prop_VPS8 PROPPIN Beta-prop_DCAF12 Beta-prop_WDR19_1st VPS8_N TPR_21
Other DBs
NCBI-GeneID: 108476631
NCBI-ProteinID: XP_017634388
UniProt: A0A0B0P901
LinkDB
Position
12:1541298..1549190
AA seq 856 aa
MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKVWDIRKKGCIHTYKGHNRGVNAIRFTPDGRWVVSGGEDNIVKVWDLTAGKLLHD
FKSHEGQIQGLDFHPNEFLLATGSADRTVKFWDLETFELIGSTGPETTGVRCLTFNPDGR
TVLCGLHESLKVFSWEPIRCHDSVDVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDILR
IDPHAVPDANCVNSHSEPKSSSGGNPTVLNENTTKASMGRLSVSQISDTLVKETKSLGRL
SISQNSDPAKESKNLASTGNVPDTPQRVNLNTAPKTTQLSSVAVPSGAAPKRSSMRTSSF
VNAPNFNKLDVIPVIVPRNDMRLEQAVESRKEVGISGRSLEQAAESRREVGIAGRSLEPS
QPAAESRKETGPAGRTLELGTDPKKELGIVGRTMPFSLQSKTSSFRKFQNNREDMDQPAI
SAPSEGAGSKVDGFSSVLDKIIFPSVKGPMKGMPVAERNTREDMCVGSGKSEPNSVVELP
PNYWDENYSQVKRTHRDAYPLESQKGGRTHVVINLEKRGKPSNCDRPNFGISPGNASVSN
MSSFNSYKQRGYHPSVEIEMPSASDEDAVADVMEQHDQFIGSMQSHLAKLQVVHRYWERN
DIKGAISAMEKMADHAVLADVLSIVTEKIDTVTLDICTCLLPLLSSLLGSEMDRHLCICL
DVLLKLVRVFGPMIYSTLSASTPVGVDIEAEQRFERCNLCFVELEKVKRCLPSVTRRGGS
VAKSAQELNLAFQEVS
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgactaccaaacgcgcgtacaagctacaggaatttgtggcacactcttcaagtgtgaat
tgcctgaagattggaagaaaatcgtctagggttcttgtgactggaggtgaagatcacaag
gttaatctctgggctattggaaaacccaacgccatactgagtttgtcaggacacacgagt
ggaatagattcagtgagctttgattcttcagaagtcttggtagctgcaggtgctgcaagt
ggcactatcaagctttgggatttggaggaggcaaaaattgttcggactttgactggtcat
agatccaattgcatctctgtggacttccatccctttggtgagttttttgcatctggttct
cttgatacaaatctcaaggtgtgggatatcagaaagaaaggatgtatccacacgtacaag
ggccataatcgaggagtcaatgcaatcaggtttacaccagatggccgatgggttgtatct
ggcggcgaggacaacattgtgaaggtttgggatttgactgctggaaaactgttgcatgat
ttcaagtctcatgaaggccaaattcagggcttagattttcatcccaatgagtttctactg
gctacaggttcagctgaccggactgttaaattttgggacctagaaacctttgagcttatt
ggttcaactgggcctgagactactggagtccgttgcttgaccttcaaccctgatgggagg
actgtactctgtggattacatgaaagtctgaaggttttctcatgggaaccaataagatgt
catgatagtgtggatgtggggtggtctagattgtcagatcttactgttcatgaaggaaag
cttcttggctgctcctataatcaaagctgtgttggcgtttgggttgtggacatcttgcgc
atagatcctcatgctgttcctgatgctaattgtgtgaatagtcattctgagccgaaatct
agttctggtggaaaccctactgtactgaatgagaacacgaccaaagctagtatgggaagg
ttatcagtttcacaaatttctgatactttagtgaaggaaacgaaatcccttgggaggtta
tccatttcgcaaaactcagatcctgctaaggagtcaaaaaatttggcatccacaggaaat
gtgcctgatacccctcagagagtcaatttaaacactgctcctaagacaactcaactaagt
tcagtagcagttcctagtggagcagctccaaagaggagttccatgaggactagttcattt
gtcaatgctccaaattttaacaagttagatgtcatacctgtgattgtgcctagaaatgat
atgaggttggagcaggctgttgaatcaagaaaagaagttggaatatcggggagaagtttg
gaacaggctgccgaatctagaagagaagttggaatagctgggagaagtttggagccgagc
cagccagctgctgaatctagaaaagaaactggaccagctgggagaactttggagctagga
actgatcctaaaaaagaactgggtattgttggaagaacaatgccattttctttgcagtca
aagacctctagttttcggaaatttcaaaataacagagaagacatggatcagccagctatc
tctgctccttctgaaggtgcaggttcaaaggtggatggattcagcagtgttctggacaag
attatatttccttctgtcaaaggccctatgaaaggaatgcctgttgctgaaaggaataca
agagaagatatgtgtgttggctctggtaagagtgaaccaaactcagtggtggagttgcct
ccaaactactgggatgaaaattattcacaagtgaaaagaacacatagagatgcatatcct
ttagaaagccaaaaaggaggaagaacacatgtagtcataaatttggagaaaagagggaag
ccttcaaattgtgatagacctaattttggtatatctccagggaatgcatctgtgtcaaat
atgtcttcattcaattcgtataaacaaagaggataccatccctctgtcgaaatagaaatg
ccttctgccagtgatgaggatgctgttgcagatgtaatggagcagcatgaccaattcatt
ggttccatgcagtctcatttagccaagttacaggttgttcatcgctactgggaaaggaat
gacataaagggtgcaatcagtgcaatggaaaagatggctgatcatgctgtgcttgctgat
gtcttgagcattgtcactgagaaaatagacactgtcacattggacatttgcacttgtctt
ctgcccctcctgtctagtctccttggaagtgagatggataggcatttgtgcatttgtctt
gacgtgctgcttaagctggtcagagtatttggtccaatgatatattcaacattatctgct
tcaacacctgttggtgtagacatcgaggcggagcaaaggtttgaacgttgcaacctctgc
tttgtagaacttgaaaaagtaaagcgatgtctcccctcagttactagaagagggggatcg
gtggcaaagtctgcccaggaattgaatctagcatttcaagaagtgtcataa

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