Gossypium arboreum (tree cotton): 108476634
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Entry
108476634 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108476634
KO
K13144
integrator complex subunit 7
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108476634
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108476634
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS7_C_plants
INTS7_N
INTS7_HB
Motif
Other DBs
NCBI-GeneID:
108476634
NCBI-ProteinID:
XP_017634393
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All DBs
Position
12:complement(10166512..10172355)
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AA seq
1143 aa
AA seq
DB search
MDKISAACAMEWSIQLDKALRSSNPALAVETILQTGPRLEQWGQEPEATKALCSIFGLVP
GEDRLFANTILLRLADAFRFGDKKIRLSVVRIFLTSIRCNRSKKLRKQKRRTFLNSRVYN
HEELLRRVKVVFDTGDVESRAMALVLFGCWADFAKDSAEIRYLVLSSMVSSNILEVKASL
FAASRFCELTDDFASVVLEMLVNMMASPETLPAVRLGGASVFTRMVCSYSVSKRAYKTGI
KLVLDSSEENFIIAMLVSLSKLVSKSTSLISEQVDVLLPYLSQENSWQMRETALKCLHLL
FVKEGCCTPVNMHVIKAVFSILHELELPSVMHCGALQILHKIFLLTLPNLPSFEKLEFDH
LLAILENAAQSPIMSKCLAALRILTDISSKLWARKNSESFAVYSSPLPLRVISLVMAQLR
SLVKPLPDPCQTSSRIFHEIKSLLKLILQLVGEHPDLGATVLGEISSFIKYFGTPNENFL
ASKHIASSEVLDFEGDMYQAFRSKLLSHIHRFVAACLQILNEAGAITTNVFDKVQLLVEQ
LHHGRIFDCYTRTVYSLLLHSYLVGILIEHPFKQELATLEHACKMLSERDNWHSYKAGIY
ATNQGAWITATFIFAKLMSRVQSDSCYCWFKSLVQFSHSEAKLWLSPLAKQGSFLVGSVG
TNELLAFLKDNFGELGQDAAGNNDVPNYRDVLVGAYKNACSSIETLERVIISRKAFCFQR
WFFSLRAKLLGAVGEILEVLDTSKQETFSIIIEVQNSALTNMKCLEKFTQFSCRLNRLAK
EFNLINSSFIGMDCESLKIIARLALSCSLLAFSAGFPHFFPNLPAYKYLRTCEREHSQQS
NLSSMLLQDLLGRLLHIDQEVSMDLCKLLDNGGCPRKCSHLQSGNYILKSGHEVKGILDI
IRYAVSTVMHLQIETNRIQNEAIISHVTKNGVELLLEIIRKWLQIPFQMPKQFFNTRPII
GSELFVYSTDSRNQSQITVSSGLHLSLNLCLQLRNASPELSLGLTKLYCVLHSRVSFQKQ
CHRERNDEEMEWQCQPWESEEIVEMNEKLFQYVTECAKKTTSYGKLFRDDDMNDDQMVYE
FVCFEPNAKGQGFSSCVLDVSHFPIGCYRIEWYSCCIDNEGSYWSLLPLNSRPVFTVQES
LFV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatatcggctgcttgtgccatggaatggagcatccagctcgacaaggctctt
cgctccagtaacccagctctagcagttgagaccattttacagactggcccaagactggag
cagtggggtcaagaaccagaagcaactaaagcactatgctccatcttcggtttagtccct
ggcgaggataggctgtttgccaacactatacttttaaggcttgcagacgcatttcgcttc
ggtgataaaaaaatcaggttatctgttgtcagaattttcttgacaagtatcaggtgtaat
agaagcaaaaaacttaggaagcaaaagagacgaacttttctaaatagcagagtgtataac
catgaagaacttttgaggagagtgaaggttgtttttgacacaggtgatgttgagtcgaga
gcgatggctttagttctttttggttgttgggctgattttgcaaaagatagtgctgagata
cgatacttggtactctccagtatggtctcttctaatattttggaggtgaaagcatcattg
tttgctgccagtaggttttgtgagttaacagatgactttgcatctgttgtcttggagatg
ctggtgaatatgatggcttcaccagaaacactgccagctgtaaggttgggaggggcaagt
gtttttactagaatggtttgctcatattcagtttcaaaaagagcttacaagacaggtatt
aagctggtgttagattcttcagaagagaatttcatcattgccatgctggtttcactctca
aaacttgtttccaagtcaacaagtcttatttctgaacaggtggatgtgcttttgccatat
cttagccaggaaaatagttggcagatgagagaaacagcattaaagtgcttacatcttctt
tttgtaaaagaagggtgttgcactcctgttaatatgcatgtgattaaagcagtattcagc
atactacatgaactggaacttccatcagtcatgcattgtggagctcttcagattttacat
aagatctttttgttaacactacctaatctcccttctttcgagaagcttgaatttgatcat
ctattagccattctagaaaatgctgcccagtccccaatcatgtcgaagtgccttgcagct
cttcgaattcttacagatatatcaagcaaactttgggcaagaaaaaatagtgaatctttt
gctgtttattcctcacctctgccattgcgggtcatctctttagttatggcacagctcaga
tcactggtgaagccattacctgatccttgccagactagttccagaatatttcatgaaatt
aaaagcctgctcaagcttattcttcagcttgttggggaacatccagatttgggcgcaaca
gtgctgggtgaaatcagttcgtttatcaaatattttggaactccaaatgaaaattttctg
gctagtaaacacattgcttcatctgaggtccttgactttgagggagatatgtaccaagcc
ttcaggtccaagcttttatctcacatacacagattcgtggctgcctgtcttcaaattctc
aatgaagctggtgcaatcactaccaatgtctttgacaaagtacaacttctggtggagcag
ttacatcatggcaggatatttgattgctatacacggactgtttactctttactattgcat
tcttatcttgttggaattcttattgaacacccatttaagcaggaacttgccactcttgag
catgcctgcaagatgttgtcagagagggataactggcattcctataaagcaggaatatat
gcaacaaatcagggagcatggattacagcaacttttatttttgcaaagctaatgtcaaga
gttcagtctgattcctgttattgctggtttaaatcattagttcagttttcccattctgag
gcaaaactctggcttagtcctttggcaaagcaagggtctttcttagtaggttcagtgggc
acaaatgaactccttgcttttttgaaagataattttggagaactgggacaagatgctgca
gggaataacgatgtgcctaattatagggatgtactagttggggcatataaaaatgcatgt
tcttcaatagaaacattagaaagagttatcatatccagaaaagcattctgttttcagaga
tggtttttttctctcagggcaaagttacttggggctgtaggggagatccttgaagtgttg
gatacatctaagcaggaaacttttagcatcataattgaagttcagaacagtgcattgact
aacatgaaatgtctggaaaaattcactcagttttcttgccgattgaacagattagccaag
gaattcaatctgataaactcctctttcatcggtatggactgtgagagtttgaaaatcatt
gcaagacttgcacttagttgttcattattggcctttagtgctggattccctcatttcttt
cccaatcttcctgcttataaatatttaagaacttgtgaacgagagcactcacagcagagt
aatttaagttcaatgttactgcaagatttgcttggccgtttattgcacattgaccaggag
gtcagcatggatctctgtaaacttttagataatggaggatgtcccagaaaatgttcgcac
ctgcagtccggaaattatatattaaaaagtggacatgaggtaaagggtatactagatata
ataaggtatgcagtttccactgtgatgcatttgcaaattgagacaaacaggatacagaat
gaggcaatcatatcccatgttacaaagaatggggtagaacttctattggaaattattagg
aaatggcttcaaattccattccagatgccaaagcagttttttaatacaaggcctataatt
ggttcagagctctttgtctacagtacagatagcagaaatcaaagtcagattactgtttca
tcaggccttcacctctcattaaatctctgtcttcaactgagaaatgcctcacctgaattg
tcacttggattgactaaattgtactgcgttcttcatagcagagtgtcttttcagaagcag
tgccacagggaaagaaacgatgaagaaatggaatggcagtgtcaaccttgggaaagtgag
gagatagtagaaatgaatgagaagttatttcagtatgtaacagagtgtgcaaagaagacg
actagttatggtaagcttttcagggatgacgatatgaatgatgatcagatggtgtatgaa
tttgtgtgttttgaaccaaatgctaaagggcaaggattctcaagttgtgtacttgatgta
tctcattttcctatcggttgttatagaatagaatggtatagctgttgtattgacaatgaa
ggatcttactggagtcttctgccgttgaactctagacctgtatttacagtgcaggaatct
ctctttgtttga
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