Gossypium arboreum (tree cotton): 108476700
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Entry
108476700 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108476700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108476700
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108476700
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108476700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FAIM1
DUF7567
DZR
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
108476700
NCBI-ProteinID:
XP_017634466
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All DBs
Position
12:complement(91064668..91069137)
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AA seq
323 aa
AA seq
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MESDSIDCMASSDVMDDDEIHHHQLSSSLSKTHSNNGNSNNSTLSSAVHASTTSVHELLE
CPVCTNCMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCK
YMSLGCPEIFPYYSKLKHEALCNFRPYSCPYAGSECAVVGDIPFLVTHLRDDHKVDMHSG
CTFNHRYVKSNPQEVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLRFMGDEIEA
RNYSYSLEVGGNGRKLTWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLR
VTGRIWKEQQNPEGGACIPNLCS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatagtattgattgtatggcatcatcggatgtgatggatgatgatgagatc
catcatcatcagttatcttcttcattgtcaaagacccacagcaacaatgggaacagcaac
aacagtaccttgtcatcagctgttcatgcaagcactactagtgtccatgaactccttgaa
tgccctgtttgtaccaattgtatgtaccctcctattcatcagtgccacaatgggcatact
ctctgttcaacttgtaaaacgagggtacacaatcgatgccccacttgtagacaagagctc
ggtgatattaggtgtctagcactagagaaggtggctgaatcacttgaattaccttgcaaa
tatatgtcacttggatgccctgagatctttccctactatagtaaactcaagcatgaggct
ctatgcaacttcaggccgtatagttgcccatatgccggatcggaatgtgctgttgttggt
gatattccattccttgttacacatctaagggatgaccacaaggtggacatgcattctgga
tgcacgtttaaccatcgatatgtgaagtctaatcctcaagaagtagaaaatgcaacatgg
atgctaactgtatttcattgttttggtcaatacttctgtctccattttgaagcctttcag
ctcggagtggctcctgtttacatggcattccttcgtttcatgggcgatgagattgaagct
cgcaactacagttatagcctagaagttggagggaatggtaggaaactcacttgggaaggc
accccgagaagcataagagatagccaccgaaaggttcgggatagccacgatggccttatt
atacagcgtaacatggcgcttttcttctctggaggggatagaaaagagttgaaactacga
gtaacggggcggatatggaaagaacaacaaaacccggaaggtggtgcctgtatacccaac
ctttgtagttaa
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