| Entry |
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| Name |
(RefSeq) SWI/SNF complex component SNF12 homolog
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| KO |
| K11650 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D |
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| Organism |
gab Gossypium arboreum (tree cotton)
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| Pathway |
| gab03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:gab00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108476711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:gab03021]
108476711
03036 Chromosome and associated proteins [BR:gab03036]
108476711
Transcription machinery [BR:gab03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108476711
Chromosome and associated proteins [BR:gab03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108476711
PBAF complex
108476711
GBAF(ncBAF) complex
108476711
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
12:110275403..110278700
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| AA seq |
524 aa
MNNTNIPKSFGAPSQFGNPGTVPKSQSIPMNNQPQTQGGPQFPGHFQLSEPQAQVLARAQ
YVQAQPPAHSQFPAQVQSQSGSNSNATATHSPLVSTPGSGGVKRSSQKPPSKNSGSSNSN
MASLFKTMELTPAALRKKRKLSERQIPDKVAAILPECALYTQLLEFEAKVDAALSRKKTD
IQQSIKNPPCVQKTLRLYVFNTYANQGQTDSDKKSTEAPSWSLKIIGRVLEDGKDPVLAG
KAQKLYPKFSSFFKKITVYLDASLYPDNHVILWESARSPALHEGFELKRKGDKESTVRIR
LEMNHRPERFKLSPALAEVLGIEVDTRPRILAAIWHYVKSKKLQNYEDNSFFSCDPPLQK
VFGEEKMKFIMVSQKISQHLTPLPPIHLEHRIKLSGNCPVGSTCYDVLVDVPYPLETEKS
AFLADMEKNKDIDACDEVICTSIKKIHEHCRRRAFFLGFSQSPAEFINALIASQGKDLKL
FAGEANHNAEKERRSEFYNQPWIEDAVIRYLNRKSMGGDSLGST |
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| NT seq |
1575 nt +upstreamnt +downstreamnt
atgaacaacactaacataccaaagagctttggggctccatcccagtttgggaatcccggg
acggtgccaaaatcgcaatctattcccatgaacaatcaaccacagacacaaggtgggcct
cagtttccgggccacttccaattgtctgagcctcaagcacaggtgcttgcgcgtgcacaa
tatgtgcaggctcagcctcctgctcattcccaattcccggctcaggtgcagtcacaaagc
ggtagtaatagtaatgctacagccacccattcccctttggtttccacccctggctcagga
ggtgtcaagcggtcttctcagaagccaccttcgaaaaattctggttcatctaacagtaat
atggcttctctgtttaaaacaatggagttaaccccggctgctcttaggaaaaagcggaag
ctctcagagagacaaatacctgataaggtggctgcaatcttaccagaatgcgctctatat
actcagttgcttgaatttgaggctaaggtcgatgctgctttatcgagaaagaagaccgac
attcaacagtctattaaaaatcctccctgtgtgcagaagactcttagactatatgttttc
aatacttatgccaatcagggacaaacagattctgacaagaagagtaccgaggctccatca
tggtcacttaagattattggtagggttttggaagatgggaaagaccctgttctggctgga
aaggcgcagaaattatacccaaaattctcatctttctttaagaaaattacagtatatttg
gatgcaagtctctatccagataaccatgtgatattgtgggagagtgctcgatcacctgcc
cttcatgagggttttgagttgaagaggaaaggagacaaggaatcaactgtgagaataaga
ctggaaatgaatcatcggcctgaaagatttaaactttctcctgctctagcagaagtcttg
ggaattgaagtagatacacgcccaagaatcttggctgcgatttggcattatgtgaagtcg
aagaagttgcagaattatgaagacaattccttcttttcatgcgatccaccgctgcagaag
gtattcggggaagaaaaaatgaaattcattatggtttcacaaaagatatcacagcattta
actcctctaccacctatacatttggagcataggatcaagctttcagggaactgtcctgtt
ggatccacttgttacgatgtcctggttgatgtgccttacccattagaaacggagaagtct
gcatttttggcagacatggaaaagaacaaagatattgatgcatgtgatgaagtgatttgt
acttctataaagaaaatacacgagcattgtcggagacgagctttcttccttggtttcagc
cagtctcctgcagagtttattaatgctttgatagcttctcaaggcaaggatttgaagctt
tttgctggagaagctaaccataatgctgaaaaggagcggcgatcagaattctataaccaa
ccatggattgaagatgctgtaatccgttacctgaatcgcaagtctatgggaggggattct
cttggaagcacttga |
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