Gossypium arboreum (tree cotton): 108476749
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Entry
108476749 CDS
T05776
Name
(RefSeq) elongator complex protein 3-like
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108476749
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
108476749
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108476749
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Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_7
Acetyltransf_10
Acetyltransf_1
FR47
Motif
Other DBs
NCBI-GeneID:
108476749
NCBI-ProteinID:
XP_017634542
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Position
11:complement(3455079..3459585)
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AA seq
600 aa
AA seq
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MAISCDVVLVCIRVTSIPSSTSRCIGNFLFFSIYSAMATAVLAPDPKKLPRPGRGGFQAH
GLTEEEARVRAIAEIVNSMVELSRKNQTVDLNAIKSAACRKYGLARAPKLVEMIAALPES
DRESLLPKLRAKPVRTASGIAIVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSY
TGYEPTSLRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIR
NLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGV
QSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFKEFFES
PLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILAMVPPWTRVYRVQR
DIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIRPEEVELVRRDY
TANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELMGKCSIVRELHVYGTAVPVHGR
DADKLQHQGYGTLLMEEAERIASREHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKYLV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctattagctgcgacgtcgtcttagtgtgtattagagttacttctatcccttcctct
acttcgcgttgtattggcaactttctttttttctctatctacagtgcaatggcgaccgcc
gtcttagctccggacccgaaaaagctcccgcgcccgggtcggggcgggtttcaagctcat
ggattaacggaagaagaggcccgggttcgagctatcgccgaaattgtgaactccatggtg
gaactgtcacggaagaaccaaacggtggacctcaacgcgatcaaatccgccgcatgtcga
aaatacgggctcgcacgtgcgccgaagcttgtggagatgatcgcggcacttcctgagtca
gaccgtgagtcccttcttccaaaactccgagccaaaccagtccgaaccgcttccggaatc
gcaatcgtggcggttatgtcgaagccgcatcggtgcccgcatattgccactacgggtaac
atttgtgtatattgccccggtggaccagattcggattttgagtatagtactcagtcgtat
actggatatgagccaactagcctgcgagcaattcgagccaggtataatccatatgtccag
gcaagaagccgtatagatcagctgaagcgattgggtcacagtgtcgacaaggttgaattc
atcttgatgggtggtactttcatgtcactgcctgcagattaccgagattattttattagg
aatcttcatgatgctttatccggacacacttctgccaatgttgaagaggcggttgcctac
tctgaacatagtgcagtgaagtgcattggaatgacaattgaaactaggccagactattgt
ctcggccctcatttgcgccaaatgctttcttatggttgtacacgattggagattggagtt
caaagcacatatgaggatgtcgctcgtgacactaatagaggacacactgttgctgcagta
gctgattgtttttgcttggcgaaagatgctggttttaaggttgttgctcatatgatgcct
gatcttcctaatgttggtgttgagagagacttggaaagttttaaggagttctttgagagc
cctttatttcgagccgatggacttaaaatttatcccacccttgtaattcgtggaactggc
ctctatgagctctggaaaactggcaggtatagaaactacccacctgagcagcttgttgac
attgtggcgaggatcttggccatggtacctccttggacacgtgtttatagggttcagcgt
gatattcctatgcctctggttacttcaggggttgagaaaggaaatcttcgtgaactagcc
ttagcgcgtatggatgacttgggcttgaagtgtcgagatgttcgaacacgtgaagctggt
atccaggacattcaccataaaattagacctgaagaagttgagcttgttcgacgtgattat
actgcaaatgaaggttgggaaacatttttgtcgtatgaagatacgcgccaggatattctg
gttgggttgttgcggctgcgaaaatgtggccggaacactacttgccctgaactaatgggg
aaatgttctattgtccgtgaacttcacgtgtatggaactgctgttccggttcatggcagg
gatgctgacaaactccaacaccagggttatggtacactcttgatggaagaagcagagcgg
attgcgagcagagagcatagatcaacaaaaatagctgttatatccggggtaggaacgcgg
cattactataggaagttagggtatgagcttgaagggccttacatggtgaaatatcttgtt
taa
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