Gossypium arboreum (tree cotton): 108476814
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Entry
108476814 CDS
T05776
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03020
RNA polymerase
gab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108476814
09124 Replication and repair
03420 Nucleotide excision repair
108476814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108476814
03400 DNA repair and recombination proteins [BR:
gab03400
]
108476814
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108476814
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108476814
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
108476814
NCBI-ProteinID:
XP_017634647
UniProt:
A0A0B0MXX2
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All DBs
Position
12:3204592..3208830
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AA seq
318 aa
AA seq
DB search
MEGISYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV
TSKDLYSSDHTVVPVDFTDNAGYDSTEPRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVFDIDPNTQQVVVVDPEAYTYD
DEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggagggaatatcgtaccagcgattccctaaggttaaaatccgagagctgaaggatgac
tacgctaaatttgagcttcgcgataccgatgcctccatggccaatgccctccgtcgtgtt
atgatctccgaggtccccaccatcgctattgacctcgtcgaaatcgaagtcaactcctcc
gtccttaacgacgagttcattgcccatcgcctcggtctcatccctctcaccagcgaacgc
gccatgtctatgcgcttctcccgtgactgtgacgcttgcgacggtgacggtcagtgcgag
ttctgctccgttgagttccatcttcgcgccaaatgcatttccgatcaaaccctcgacgtt
accagcaaggatctctatagttccgaccatactgttgttcccgtcgatttcaccgataac
gctggctacgattccactgagcctagagggattattattgtgaagttacggcgagggcaa
gagctgaggctgagggcaattgcgaggaaagggatagggaaagatcacgccaaatggtca
cctgctgcgaccgtgacttttatgtatgaacctgagattcatatcaatgaggatttgatg
gaaagcttgacgcttgaagagaagctaagctttgttgagagcagtccaactaaagtcttt
gacattgacccaaatacccaacaggttgtggtggttgatccagaggcgtatacctatgac
gatgaggtgctaaagaaagctgaagctatgggaaagccaggtcttgtggagatatatgcc
aaagaagacagtttcatctttacagttgaatccactggtgcgatcaaagcttctcagttg
gttcttaatgctatagaaatcctgaaacagaagctggatgcggttcgcctgtctgaggat
actgtggaagctgatgatcagtttggcgaactaggtgcccatatgcgaggaggatga
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