KEGG   Gossypium arboreum (tree cotton): 108476815
Entry
108476815         CDS       T05776                                 
Name
(RefSeq) uncharacterized protein LOC108476815
  KO
K13151  snurportin-1
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108476815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108476815
Spliceosome [BR:gab03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    108476815
SSDB
Motif
Pfam: SPN1_m3Gcap_bd Aft1_HRR Snurportin1
Other DBs
NCBI-GeneID: 108476815
NCBI-ProteinID: XP_017634648
UniProt: A0A0B0PGF0
LinkDB
Position
12:110335138..110339820
AA seq 422 aa
MAPHDIRRPFKRAAISDQQKRRELSLLRQAQNRRDAQQQARCLASSILSLQSAAPESQPE
QSDTEIETVPESEQESEAFSKDLDVRQASKLRGPEVRKWFARQLMLPEWMIDVPDRLAQD
WYVFARPAGKRCFVVSSNGTTVSRQRNGSILHHFPSALPAGAKIRDGSGSAQSYCILDCI
FHELDQTYYVIDMVCWNGYSLYDCTAEFRFYWLNSKLEESGACNAPSHYHKFRFSAVPVY
NCDSSGLYSAYTGVGPYAKDGLLFYNKHALYQTGNTPLALVWKDENCSQYVIDTDGKGEI
PSQQQVVLELQDDRKLVTSDDPPVLFGCLDGDIIEKSGLHTGNLLRFAIGDGGLSFADGK
LEKADLIYLGKSNRARAFADSYSKVLFQFMVRHSPLKIDDLLASINSANDQEKTPSDIEM
VG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcgccgcacgacattcgccgtccgttcaagcgagcggctatatccgatcagcagaag
cggagggagctctcgctgctccgtcaagcgcagaatcgtcgcgatgctcaacagcaagct
cgctgcttggcttcatctattctctcgctccagtctgctgcacccgaatcccaacccgaa
caatccgacaccgaaatagaaaccgtacccgaatccgaacaagaatctgaagctttttcg
aaagacctcgatgtccgtcaagcttcgaagctccgaggaccagaggttcgaaaatggttc
gcgaggcagcttatgcttcctgagtggatgatcgacgtccctgatcgcttggcgcaggac
tggtatgtatttgcaaggccagctggaaagcgatgctttgtggtttcatcaaacggaacg
acagtgagcaggcaaagaaatggctccattttgcatcatttcccatcggctttaccagct
ggagccaagatcagagatggctcgggttcagctcaatcatattgtatcctggattgcatt
ttccacgagttggatcagacttactatgtgattgatatggtttgttggaatggatactct
ctctatgattgtactgctgagtttagattctattggttgaactcgaagctcgaagagagc
ggtgcttgcaatgcaccttcacattatcataaatttaggttcagtgctgttccagtgtat
aattgtgattcgagtggcctatattcagcatacactggagttgggccatatgctaaggat
ggattactgttttataacaagcatgcactctatcaaactggcaatacacctctagcatta
gtctggaaggatgaaaactgtagtcaatatgttattgacactgatggtaaaggagagatt
ccaagccaacaacaggtagttttggagctgcaagatgatagaaaactggtaacatcagat
gaccctcccgtgctgtttggctgcttagacggggatataatagaaaagtcagggctgcat
acagggaaccttttacggtttgctattggtgatggaggattgagttttgcagatgggaag
cttgagaaggctgatttgatttatcttggcaagtccaaccgggcacgtgcttttgcagat
agttactcaaaggttttgttccagttcatggttcgacattctcctctaaagatagatgat
cttctagcatcaattaactccgcaaatgatcaagaaaagacaccaagtgacatcgagatg
gttggttga

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