KEGG   Gossypium arboreum (tree cotton): 108476858
Entry
108476858         CDS       T05776                                 
Name
(RefSeq) zinc finger protein BRUTUS-like At1g18910
  KO
K16276  zinc finger protein-like protein
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gab04121]
    108476858
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108476858
SSDB
Motif
Pfam: zinc_ribbon_6 zf-CHY Hemerythrin zf-RING_2 zf-RING_11
Other DBs
NCBI-GeneID: 108476858
NCBI-ProteinID: XP_017634708
LinkDB
Position
12:107398265..107408115
AA seq 1261 aa
MGGGQAHSDPPDKEEDRKSPLAAVAGLRLQDAPILFLLYFHTAIRAELTELRRLAVAAAA
DGKSDSYSREFVVELFRRFEFLKLVCKYHCAAEDEVVFLALDAHVKNVACTYSLEHESID
HNFDSVFYCLNALEGSENSSKALQELVFCIGAIQASICKHMLKEEKQVFPLLVKQFSFQE
QASLVWRFIGSIPVILLQDFLPWVISFSHPDEQEEIKNFVREVVPKEKSLQEVVVSWLDK
KHRTGFEFHIELAKGVQPLDGTISIKSKFKFHLIKNPLGWMKAPCFQTNPGKNPIDGLLF
WQGAIQKDLKEILAELHQVKTSSCFQNLDFIVLRLKFLADVLIFYSNALEKLFYPVLVDV
SNIQLSLPAQDLYIASDIKHLLYLVNYNSQKGITANEFVKELCQKLESFVMNIDIKFSLQ
ENEVFPIISKNCSKEMQQQLLCISLQVVPLGLLKCVVTWFAAHLSEDESRSILHIIKEGY
SLTHASFASLLLEWFLLGYSGKTSVESFRRDLEKLFSSRCSFLPVSIEEDAGSSSFLSDM
SLGKGSKSKIIKPVFVYKGKKDFPYSSASSHGIKHDGTSNCGGINLHIFFPKMTRDLCFF
PDFSVEKNCVDYAIDEPIPMDMIFFFHKALKKDLDYLVLGSALLTENAGFLPEFRQRFHL
IHFLYQIHSDAEDEVAFPALEAKGNHRNISHSYSLDHEIEAENFSKISLILDEIYELQLE
YSSGEPVTLDWVAKHQKLCIDLQDTCKSMHKLLSDHVHREEVELWPLFRECFTLKEQERI
IGNMLGRTGAEILQDMIPWLMSSLTPDEQQTVMSLWHSATRNTMFDEWLGEWWEGHKIAK
ETEESTIPSWTPDPLEIILTYYPEVLNKREAICDNFSRTSSNGADIELLRLSNIDDKVKA
FKGDENCSECSKLFSMSSDKRCNEAADLMGRTNEPDQKFQVTHNTGQCKQLKTMSQEDLE
AAIRRVSSDTSLDPERKSHVMQNLLMSRWILKQQISNLEVNNSNNGEGIPGQHPSYRDPL
ELALGCKHYKRNCKLFAPCCNQLYTCIHCHNEVADHKLDRKSVTKMMCMKCLVIQPIGFT
CSMVSCHNLSMGKYYCRICKLFDDERQIYHCPYCNLCRVGKGLGVDYFHCMNCNACMSRS
LSLHVCREKSFEDNCPICHEDFFSSTAPVKALPCGHMMHSACFQDYTCTHYTCPICSKSL
GDMQVYFKMLDAFLAEEKIPEEHHDRNQAILCNDCETKGTAPYHWKYHKCSNCGSYNTRV
L
NT seq 3786 nt   +upstreamnt  +downstreamnt
atgggcggtggccaggctcactcagacccgcccgacaaggaggaggaccgaaagtcgccg
cttgctgcggtggctggtctgcggctccaagatgctcctattcttttcctgctttacttc
catacggctatacgggcggagcttactgagctccggcgtctggcagttgcggccgctgcg
gatgggaagagtgattcatactcgcgtgaattcgtggttgagctgtttagaaggttcgag
tttcttaagcttgtttgtaagtatcactgcgctgctgaagatgaggttgtctttctagct
ctggatgcacatgttaaaaatgtggcttgtacatattcactggagcatgaaagtatagat
cacaacttcgattccgttttctattgcttaaatgcattggagggaagtgaaaattcctct
aaagcattgcaagaacttgtattttgcattggcgccatccaagcttctatttgcaagcat
atgttgaaagaagaaaagcaggttttccctctgctggttaaacaattttctttccaagaa
caagcttctctggtgtggcggttcattggtagcatccctgtaattctgttgcaggatttt
ctaccatgggtgatctctttttctcatccagatgagcaagaagaaataaaaaattttgta
agagaagttgtaccgaaggaaaaatcattgcaagaggttgtagtatcctggctagataag
aaacaccggactggttttgagtttcacattgagcttgcgaaaggagttcagcctcttgat
ggaactatctctatcaaaagcaaattcaaattccatttgattaagaatcctcttggatgg
atgaaagcgccttgttttcaaacaaatcccgggaaaaatccaattgatggccttcttttc
tggcaaggagccattcaaaaagatttgaaagaaattctggcagagctgcatcaagtaaaa
acatcaagctgctttcaaaatcttgattttattgtactcagactgaaattccttgctgat
gtcctaatcttctacagcaatgcactggagaagcttttttaccctgtcttggttgatgtt
tccaacattcagctgtctctgcccgctcaagatctctacattgcaagtgatattaaacat
ttactgtacttggtaaattataatagtcaaaaggggataacagcaaatgagtttgtgaag
gagctgtgccagaaactggagtcctttgtgatgaacattgacataaaatttagtttacaa
gaaaatgaggtattccccatcattagcaagaactgcagtaaagaaatgcagcagcagctt
ctgtgcataagcctccaggtggtgccactaggtttgctgaaatgcgtggtcacctggttt
gctgctcatttatctgaggatgaatctaggtccattctgcatattataaaggaaggatat
tctttgacccatgcatcttttgcatcccttttattggagtggttccttttaggttattca
ggaaaaacctcagttgaaagctttagaagggacttggagaaattgttcagcagcagatgc
tcttttcttcctgtgtcaattgaggaggatgctggatcttcttcctttctttccgatatg
tcccttggtaaaggatctaaatctaagataattaagccagtttttgtttacaaaggaaag
aaggacttcccttattcttcagctagctcccatggcattaagcacgatgggacatcaaac
tgcggtggaatcaatttgcatatattttttcccaaaatgacaagggatttatgctttttt
ccagatttttctgttgagaagaactgtgttgattatgctattgatgaaccaataccaatg
gatatgattttcttctttcataaggctttaaagaaagatttggattatcttgtccttggt
tcagctctgctgacagaaaatgccgggtttctccctgagttccgccaacgcttccatttg
atacacttcttatatcagatccacagtgatgcagaggatgaggtagcttttccagctttg
gaagcaaagggaaatcacagaaatatcagccactcttattctctggaccatgaaatagaa
gctgaaaacttcagcaaaatatccctcattttggatgagatatatgaattgcaacttgaa
tattctagtggtgaaccagttacactggactgggtggcgaagcaccaaaagctgtgtatt
gatcttcaggatacatgtaaatcgatgcataagttactctctgatcatgtgcatcgtgaa
gaagttgaactttggcccttatttagagaatgtttcacactaaaggagcaagaaaggatc
ataggaaacatgctgggaagaacaggagcagaaatattacaagatatgataccctggctt
atgtcatctttgactccggatgagcagcaaactgttatgtccttatggcacagtgccaca
agaaatacaatgtttgatgaatggttaggagaatggtgggaaggacataaaatagctaag
gaaacagaggagtcaactattccttcatggaccccagatccattggagattatcttaaca
tattatcctgaagtccttaacaaacgagaagccatttgcgataatttctcaagaactagc
tcgaatggtgctgatattgagctgttaagattgtccaacatagatgataaagtaaaggct
tttaaaggtgatgaaaactgttctgaatgttccaaactgtttagcatgagcagtgacaag
cgatgcaatgaagcagctgatctgatgggcaggactaatgagccagatcaaaagtttcaa
gtaactcataacactgggcaatgcaaacaactaaagacaatgagtcaagaagatctagag
gctgccataagaagggtgtcatctgacacatccttagatcctgaaaggaaatcacacgtg
atgcagaacttactaatgagtcgttggattcttaagcaacagatatctaatttagaagta
aacaattcaaataatggagaaggaattccaggtcagcatccatcgtatcgtgaccctctg
gaactagcattgggttgtaaacactacaagaggaactgtaaactttttgccccatgttgt
aaccagctttatacatgcattcattgccataatgaggtggctgatcataaattggataga
aaatctgtgacaaaaatgatgtgcatgaaatgcttggtaattcagccaattggatttaca
tgctcaatggtttcctgccataatctatcaatgggaaaatattattgcaggatctgcaag
ttattcgatgacgaaaggcaaatttatcactgcccttactgtaacctctgccgagtaggg
aagggattgggtgttgactactttcactgcatgaattgcaatgcctgcatgtcacgatct
ctgtcactgcatgtatgcagagaaaagtcctttgaggacaattgtcctatttgccatgaa
gatttcttcagctccacagctccagtaaaagcgcttccttgtggacatatgatgcactca
gcttgttttcaggattatacttgtacacactacacctgcccaatctgtagcaagtcactt
ggggacatgcaggtctattttaagatgttggatgcttttttggctgaagagaaaattcca
gaggaacatcatgaccgaaatcaggcaatactatgcaatgactgtgagacaaaaggaaca
gctccctaccattggaagtatcataagtgctccaactgtggctcatataacacgagagta
ctatag

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