Gossypium arboreum (tree cotton): 108477097
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Entry
108477097 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108477097
KO
K17925
sorting nexin-13
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gab04990
]
108477097
Domain-containing proteins not elsewhere classified [BR:
gab04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108477097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
108477097
NCBI-ProteinID:
XP_017635036
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All DBs
Position
12:3793877..3801507
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AA seq
1041 aa
AA seq
DB search
MKPMETIQDLIDEAKVRTLWLAMVIFIVTYFLSHTSTSMWMNLPIAIIIVSTFRAIANEV
EFKWKVKSVHPRTYLSHLERKQLSVNDSRLFSSPPPPKWKQKIDSPIVEAALNEFIDKIL
RDFVINLWYSEITQDREAPELIRALILDAIAEITERVKEINLVDLLTRDIVDLIGDHLDL
FRRNQAAIGVDVMATLSSEERDERLKHHLMVSGELHPALLSPESEYKVIQQLFGGVLAVV
LRPREAQCPLVRTIAREIVTCLVVLPLLNLASPRYINEVIEYVLLAIKEDLNKIVAGFDQ
SSVGVRDDGSMSCKTPSLNRQETDLNLVRIDNQKETYPVCNRYEEEPVHHRPADWARKLE
AATQRRTEVLAPENLENMWTKGRNYKKKERKYVKTGFQESIPKGSETKSSVLMGNSVNDF
SRNKTRTSMRSEEKTRTQLEHGLSLDTQSCDDNMIDTKLAKSSSFEGDRHVNTFNNVSEK
AADGNKIRLKRSSSTSDLKVGTDTKKALSVDVEGPIFSECYGPDFDRHSEEYGGKIASNL
VLRNEGPHIPKLRCRVIGAYFEKLASKSFAVYSISVTDAENRTWFVNRRYRNFERLHRHL
KEIPNYSLHLPPKRIFSSSTEDTFVHQRCIHLDKYLQELLSIPNVAEQHEVWDFLSVSSK
NYSFGKSSSVMETLAVSVDDAVDDIVRQFRGVSDGLMRKVVGSSSPPSEASSSATGRTLS
WNADEIAKDISKHYNLDTVHSASDNEDGNKDGDHGYEDDGSYSQGLDMHLDNELNSKNLP
PLVIECGRESVNLIYEKHNLGVKPEPFGQGGSPKVKISATSSHLEDPVGMPPEWTPPNVS
VPLLNLVDKVFQLKRRGWLRRQVFWISKQILQLVMEDAIDDWLLRQIYWLRKEETITLGI
RWIQDLLWPGGKFFRAIGDIHSKFDNSNLNQTPIPLLNFSQFGGSNASKPGSFEQQLEAT
RRASDIKKMLFDGPPATLVGLIGYKQYRRCARDIYYFTQSAICIKQLAYAILERLLISVF
PELRDLVMDLHGKNISTLHRK
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatggagacaatacaggatctgattgacgaagccaaagtacgtacactttgg
ttggccatggttatctttatcgtcacttatttcttgtctcatacaagtacgtcaatgtgg
atgaatttacctatagcaattattattgtttccacattcagagctatagctaatgaggtt
gagttcaaatggaaagttaaatcagttcatccccgaacctatttatctcatttggagagg
aaacagttgtctgtgaatgattcccgcctttttagctcaccgcctccacccaagtggaag
cagaagattgattctcctatagttgaggctgctctcaatgaatttattgataaaatactt
agggattttgtcattaatttgtggtattcggagataactcaagatagagaagcccctgag
ctgatacgtgcattgattttggatgctattgctgaaataactgaaagggtgaaagagata
aaccttgttgatttgcttacaagggatatagttgatttgataggagatcacttggatctt
tttagaagaaaccaagctgcaataggtgttgatgttatggcaacattatcatctgaggag
agggatgaaagattgaaacaccaccttatggtttctggagagcttcatcctgcattgctt
tcaccagagagtgagtacaaggttattcagcagctttttggcggagttttagcagtagta
ttgagacctcgagaagctcaatgtcctttggttcgaactattgctcgtgagattgtaact
tgcttggtagtgctacctcttttgaatttggcaagccctcggtatatcaatgaagtgatt
gaatatgttctacttgccattaaagaagatttgaataagatcgtggcaggttttgatcag
tcttcagtgggagtacgtgatgatggttctatgtcatgcaaaacaccgtccttgaataga
caagaaactgatttaaatttggttagaattgacaatcagaaagaaacatatccagtttgt
aacagatatgaggaagaaccagtgcaccatagaccagctgattgggctcgaaaattagag
gcagcaacccagagaagaactgaagttcttgctcctgaaaatcttgaaaacatgtggaca
aaaggaagaaactacaaaaagaaggagagaaaatatgtaaaaacaggatttcaagaatct
atccctaaaggttctgagacaaagagtagtgtactgatggggaattcagtaaatgatttc
tcaagaaacaagaccagaacttctatgcgaagcgaagagaaaactaggacgcaactagag
catggcttgagccttgacacccagtcatgtgatgataacatgatagacacaaagttagct
aagtcatcatcatttgaaggagatcgtcatgttaatacatttaataatgttagtgagaaa
gctgctgatggaaataaaattaggcttaagagatccagtagtacctctgatttgaaagtt
ggaactgatacaaagaaggcacttagtgtagatgttgaagggcctattttttcagaatgc
tatggccctgattttgacaggcatagtgaagaatatgggggtaagattgcctcaaatcta
gtacttcgcaatgaggggccacatattcccaagcttaggtgtcgggttattggagcatac
tttgagaaacttgcatcaaaatcatttgcagtttattcaatttctgtgactgatgcggaa
aacagaacttggtttgtcaatagaagatacagaaattttgaacggttgcatcgacatctg
aaagaaattcccaattattcattacatttgccccccaaaaggatattttcatcaagcact
gaggatacttttgttcatcagcggtgcattcatcttgacaaatatctgcaagaactgttg
tctatacccaatgtggctgaacagcatgaagtgtgggattttttaagtgtttcctcgaag
aattactctttcggaaaatcctcatcagtgatggaaacccttgcagtcagtgtggatgat
gctgtagatgatattgtacgccaatttaggggagtatcagatggcttaatgcgcaaagta
gttggttcatcctctccccctagtgaagcctcttcttcagccactggcaggacgctgtca
tggaatgcagatgagattgctaaagacatttcaaagcattataacttagacacggtacat
agtgcttctgacaatgaagatggtaacaaagatggggaccatggttatgaggatgatgga
tcatattcacaaggtcttgatatgcatttggacaatgagttgaactcaaagaatttgccg
ccactggtaatagagtgtggtcgggagtctgttaatttaatttatgagaaacataattta
ggtgtgaaacctgaaccgtttggccagggtggatctcctaaggtaaaaatatcagcaacc
tccagccatttggaggatccagttggaatgccccctgagtggacaccgcctaacgtgagc
gtacctttgctgaatctagttgataaggtgtttcagcttaagagaagaggctggctaaga
agacaggtcttttggatatctaagcaaatattacagctagtgatggaggatgccatcgat
gactggctcttgcgccagatatattggcttcggaaggaggaaacaattaccctagggatt
cgatggattcaagatctcttgtggccaggtggtaaattctttagagcaattggggacatt
cacagcaaatttgataatagtaatctcaaccagacacctatacctctgctcaacttcagc
caatttggaggaagtaatgcctctaaacctgggtcctttgagcaacaacttgaggctact
cgtagagcaagcgacatcaaaaaaatgctttttgatggacccccagcaacattagttggc
ctgattggatataagcaataccgacggtgtgcaagagacatttactatttcactcagtct
gctatatgtatcaagcaacttgcttatgcaatcttagaacgactacttatatcagtgttc
cctgagctacgggatcttgtgatggatcttcatgggaagaacatatcaacattgcataga
aagtag
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