Gossypium arboreum (tree cotton): 108477222
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Entry
108477222 CDS
T05776
Name
(RefSeq) ABC transporter G family member 38
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108477222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108477222
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108477222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
ABC_trans_N
AAA_22
AAA_16
AAA_25
RsgA_GTPase
AAA_18
AAA
AAA_23
AAA_33
Rad17
AAA_30
AAA_28
NACHT
MMR_HSR1
TsaE
cobW
AAA_17
nSTAND3
Zeta_toxin
FeoB_N
AAA_5
ABC2_membrane_3
AAA_7
ABC_ATPase
Ploopntkinase3
AAA_19
PDR_CDR
T2SSE
Mg_chelatase
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
108477222
NCBI-ProteinID:
XP_017635199
LinkDB
All DBs
Position
7:complement(105771743..105779527)
Genome browser
AA seq
1421 aa
AA seq
DB search
MSMEIGHYRTCSTMSGSRVQEEDDEEALKWAALERLPTYDRARKGVLHGVLGDLKEIDLR
KLGFQESKELLNRFIKDADKHEEFLKNIKQRIDRVSLNLPTIEVRFEDINVQGEAYVGSR
ALPTISNSLFNIIEGVGHYLHILSSHKKKFSILRDVSGIIKPGRLTLLLGPPGSGKTTLL
QALTGKLDPLVKFSGKVTYNGHEMHEFVPQRTSAYISQYDIHLPQLTVRETMAFSAKCQG
VGTGYDMLTELLRREKELNIRPDPYIDALMKASVLKGHKEEIVTDYALKILGLEVCADTI
VGDAMMRGVSGGQKKRVTTGEMLVGPVGALFMDNISTGLDSSTTYQIVNCIKQSIHIFNK
TAIISLLQPPPETFELFDDIILLSEGRIVYQGPREYVLNFFESMGFKCPERKGVADYLQE
VTSRKDQGQYWFRHETPYRFVSVNEFAEAFESFHIGLDIKNQLAVPFDRSKNHPAALTKT
RYGANKMELMKACLSREVILMKRNVFLHGFKIFQLELGAVIVATVFVEARKHHSTIADGT
VYLGALFFVLNTINFTGFFELPLTIDKLPVFYKQRDRLFYPSWAFSLPTAVLGIFISMFE
VAVWIAITYYVIGFDPNITRMLKQYLVLVMSGQMSYALFRCLAALTRDHVVANTAGCLSV
MWLLIFGGFILSRENMPNWLIWGYWTSPLMYVQTAISVNEFLGHAWNKALNGTKETVGVA
VLKARGVFTNPNWYWISIVALIGFIFLFNAISALAFAYLDEYGKSQAVFLSEESTKEDTT
MASEGDGTLLNKSNSKTKRASRNAVAVHNYQEKGMLLPFTPLSVTFENITYSVDMPKGMR
SQGVLDDRLMLLNQVSGAFRPGVLTALMGVSGAGKTTLLDVLAGRKNSGYTEGNITVSGY
QKKQDTFARVTGYCEQNDIHSPLVTVYETLLYSAWLRLPHDIDPESRELFVEEVMELIEL
KSLRDALVGFPNVNGLSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN
TVDTGRTVVCTIHQPSIDIFESFDELFLLTRGGEEIYFGPLGRMSSHLIKYFEDINGVSK
IKEGYNPATWVLEVTTRPQEEILGVKFADVYKRSDLYRRNKALISELSTPPPGSHDLHFP
TKYAQPYLTQFIACLWKQHRSYWRNTSYNAVRIYFSTAMSIIFGVLFWNLGSKRGTKQDL
FNAMGAMYTAITFMGTQSAASVRPVIIAERTVFYRERAAGFYSALPYAFAQVAIEIPYTI
AQVAIYGIIVYAMMGFQWTASKFFLNTFIMFITVLLYIYYGIMVVSASPNQPTAAVLSGI
FYTMWSLFSGFIIPRPRIVVWWRWYAWVCPVSWSMWGMTTSQYGDLQNKLETGETVAQFV
EDYFGFRHDWLWIVCLVLIGFTLLFASVFAFSMKFFNFQKR
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggaaataggacattacaggacatgttcgaccatgtcaggcagcagagtgcaa
gaagaagacgatgaagaagcactgaaatgggcagctctcgaacgactccccacctacgac
cgtgctcggaaaggagttttgcatggggttttgggtgacttgaaagagattgatcttcga
aaacttgggttccaagaaagtaaagagttgcttaataggtttataaaggatgctgataaa
catgaagagttcttgaagaacatcaaacaacgaatcgacagggtttctttgaatttgcca
acaatagaagttcgattcgaagacataaacgtacaaggagaagcctatgtcggtagtagg
gctttgccaacaatctccaactcacttttcaatattatagagggtgttgggcattacctt
catatactctcaagtcacaagaaaaagttctcaattttacgagatgtgagtgggattatc
aagccaggcaggttaactctacttttaggcccaccaggttcaggaaagaccaccctactt
caagcattgaccggtaaacttgacccactagtcaagttttctgggaaagtaacgtataat
ggtcacgaaatgcatgaatttgttccccaaagaacatcagcttatatcagccaatatgat
atccatttacctcaactgactgttagagaaactatggctttctctgccaaatgtcaaggc
gttggcactggttatgatatgcttactgagctccttagaagagaaaaggagttgaatatt
agaccagatccttatatcgatgccttaatgaaggcatcagttctgaaaggacataaggaa
gaaattgttacagactatgctctcaagattttaggactggaagtttgtgctgacaccata
gtaggtgatgcaatgatgagaggtgtttctggtggacaaaagaaacgtgtaactacaggg
gagatgcttgttggtcctgtaggagcactttttatggacaatatatcaacaggtcttgat
agttccacaacttaccaaattgtcaactgtatcaaacaatcaatccacattttcaacaaa
actgctataatctcacttcttcagcccccacctgaaacttttgagctttttgatgacatt
atccttctttcagaaggacgaatagtttaccagggccctcgagaatacgttcttaatttc
ttcgaatccatggggttcaaatgtcctgaaagaaaaggcgttgcggattacttacaagaa
gttacatcaagaaaagatcaaggacaatactggtttcgtcacgaaacaccgtatcgtttt
gtttcggttaatgaatttgctgaagccttcgagtcgtttcatattggattagacatcaaa
aaccagcttgctgttccatttgacaggtcaaagaatcaccctgcagctttgacaaaaact
agatatggagctaacaaaatggaattgatgaaagcttgtttgtcaagagaagttattttg
atgaaaagaaatgtgttcttacatggtttcaagatatttcagttggaactcggtgcagtt
atcgttgctaccgttttcgttgaagctagaaagcatcatagtacaattgcagatggaaca
gtttacttaggggctctcttttttgtcctaaacacgattaacttcaccgggttttttgaa
cttccattaacgatcgataagcttccggtcttttacaaacaaagagaccgtctgttttat
ccatcatgggcattttcattaccaacagcagttcttggtatctttatatcaatgtttgaa
gttgctgtttggattgctataacttactacgtaataggatttgatcccaacattacaagg
atgttaaaacaatatcttgtccttgtcatgagtggacaaatgtcttatgcactgtttaga
tgccttgctgcattaactagagatcacgttgttgctaacacagctggttgtctttcagtg
atgtggcttttaatatttggtggatttattttatcaagagaaaatatgcccaactggttg
atatggggatattggacatcgcctcttatgtatgttcaaactgccatttcagtaaatgaa
ttcctaggccatgcttggaataaagcacttaacggaacaaaagagacggttggagtagcg
gtcttgaaagctcgtggggtattcactaatccaaattggtattggattagtattgttgca
ttgattggctttatattcctcttcaatgccatatccgctctggcttttgcttaccttgat
gaatatgggaaatcgcaggcagtgtttttgagtgaagaatctactaaagaagacactacc
atggcaagtgaaggtgacggaacattgttaaacaaaagcaactcaaagactaagagagca
tctagaaatgccgtggcggttcataattatcaagagaaaggaatgcttcttccttttaca
ccactctcagttaccttcgagaacatcacgtattcggttgatatgccaaagggaatgaga
tcccaaggcgtgttggatgatagattgatgcttttaaatcaagtgagtggagcattcaga
ccaggtgttttaacagctttaatgggtgttagtggagctggtaagactacactgcttgat
gtgttagcagggaggaaaaacagtggatatacagaaggaaacatcactgtttcaggctat
caaaagaaacaagatacttttgctcgagttaccggttattgcgagcaaaacgacattcat
tctcctcttgtaactgtctatgaaactttactatactcggcgtggcttcggttgcctcat
gacattgatcctgaaagtagagagctttttgttgaggaagttatggaattgattgagttg
aagtcattgagagatgcattggttggatttcctaacgtgaacggactatccatcgagcag
cgtaaacggttaaccattgcagtcgagcttgttgctaacccttcaataattttcatggat
gaaccaacctcaggtcttgatgcaagagcagcagctattgtgatgagaaccgtgagaaac
acggtggatacgggaagaaccgtggtatgcacaattcaccaacccagtatcgatatattc
gaatcttttgatgagctcttcctattaacacgcggaggtgaagaaatatatttcggtcct
ctaggccgtatgtcaagccatttgatcaagtactttgaggatatcaatggagtaagcaag
ataaaagaaggctataacccggcaacctgggtgttggaagtgacaacacgacctcaagaa
gagattctaggagtaaaatttgccgacgtgtacaaaagatccgatctttatagaagaaac
aaggccttgatttcggagttgagcactccacctcctggttcacacgatctccattttccg
accaagtatgcacaaccctaccttacacaattcatagcttgtttatggaaacaacacaga
tcatattggaggaacacatcatacaatgcagtgaggatttatttcagtactgcaatgagc
attattttcggagttttattctggaaccttggaagcaaaaggggaacaaaacaggatctt
ttcaacgcaatgggtgcaatgtacactgcaattacattcatgggaacacaaagtgctgct
tcagtgagacctgttataatagctgaaagaacagttttttacagagaaagagctgctgga
ttttattctgcattgccttatgcttttgcacaggttgctattgaaatcccatataccata
gctcaagttgctatatatgggattatagtttatgcaatgatggggtttcaatggacagca
tccaagttcttcttaaacacattcatcatgttcatcacagttcttctctacatatactat
ggaatcatggttgtatctgcaagtcctaatcaaccaactgctgctgtactttctggtatc
ttttatacaatgtggagtctcttctccggtttcataattccgcgaccgaggattgttgtg
tggtggagatggtatgcttgggtgtgtccggtttcatggtccatgtggggaatgacaact
tcacagtatggtgacttgcagaacaagttagagacaggagaaacagtggctcagttcgtg
gaagattactttggcttcagacatgactggttatggatagtctgtcttgtcctaattggg
tttactttgttgtttgcttctgtatttgctttctccatgaaattcttcaacttccaaaag
agatga
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integrated database retrieval system
