Gossypium arboreum (tree cotton): 108477252
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Entry
108477252 CDS
T05776
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04016
MAPK signaling pathway - plant
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108477252
04075 Plant hormone signal transduction
108477252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108477252
Transcription factors [BR:
gab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108477252
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Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_INO4
DUF5547
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
108477252
NCBI-ProteinID:
XP_017635233
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Position
12:116723213..116725243
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AA seq
475 aa
AA seq
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MSSSSSSSLITLGQDASPTLQQRLHFIVQSRPEWWVYSIFWQASRDVDGRVVLSWGDGYF
RGTRDGTGKSINRLSPSKLGSSFERKRSGKDQVQAYFNEVMDVDRMVDGDVTDYEWYYTV
SMTRSFAVGDGILGKAFGSGSHIWLGGDHELQLYQCERVREARMRGIQTLVCLPTSFGVV
ELGSSDIIMEDWGTLQLTKSIFSSGINNSLGSNQPAHDSQPQISTPSIPFVDFGMVSGDQ
KERILEDKQQVEPKKETTGLGRSSSESDGDFASADTEFNAGGRSKKRGRKPGNGKESPIN
HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLSDAVAYIKELRSKIDKLEAQLLVQS
EKSKLNPINVFENQTTKSAFDNTMKQSSTYWPKTVEVDVKIVGSEAMIRVRSPDIDHPAA
RLMDALRDLELPVHHASVSNVNDLMLQDVVVRVPTGIFITDEMLSTAILQRCTLN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcttcttcgtcttctcttattaccttaggtcaagatgcctcacctactttg
caacaacgcctccatttcatcgtccaaagtaggcctgaatggtgggtatactccattttc
tggcaagcttcaagggatgttgatggtcgcgttgttttgtcatggggcgatggctatttt
cgagggacccgagatggtacgggaaaatccatcaataggctgagcccttccaaactgggg
tccagtttcgagaggaaaaggtcgggaaaagatcaggtgcaagcttattttaatgaagtg
atggacgtggaccgtatggtagatggcgatgtgactgattatgagtggtactataccgta
tccatgacccgatcattcgctgtaggtgatgggattcttgggaaggctttcggatcaggc
tcccatatttggttgggtggagaccatgaactccaattgtaccagtgtgagcgtgttaga
gaagctcgaatgcgagggattcaaacattagtttgtcttcctacatccttcggggttgtc
gaattgggatcttctgatatcatcatggaagactggggcacccttcaactcactaaatcg
atattcagttctgggatcaacaacagcctgggttcaaatcaacctgcccatgattcccaa
ccccaaatctcaaccccaagtattccttttgttgattttggaatggtttcaggtgatcaa
aaggagcggattcttgaagacaaacaacaagtcgagcccaagaaagaaaccacaggttta
ggccgttcgtcatcggaatctgatggggatttcgcctctgcagacaccgagttcaatgcc
ggcggccggtcgaaaaagagaggtagaaaaccagggaatgggaaagaatcccctataaac
cacgttgaagcagaaaggcaacgacgtgagagactgaaccatcgtttctacgcacttcgt
tccgtggttccaaacgtatccaagatggacaaagcctcattactttcagatgcagtagcc
tacatcaaggaactaagatcaaaaatcgataaactagaggctcaactcctagtacaatct
gaaaaatccaagttgaaccccatcaatgttttcgaaaaccaaactaccaaatccgcattc
gacaataccatgaaacaatcctctacttattggccaaagacagtggaagttgatgtgaag
atagtaggatccgaagccatgattcgggttcgaagtccagatatcgatcatccagccgca
cgattgatggatgcacttcgagacctagagctaccagtacaccatgccagtgtatcaaac
gtcaatgatcttatgctacaggatgttgttgtcagagtccctactggaatattcataacc
gacgagatgcttagtactgcaatccttcagagatgcacgttgaattag
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