Gossypium arboreum (tree cotton): 108477339
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Entry
108477339 CDS
T05776
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00730
Thiamine metabolism
gab00900
Terpenoid backbone biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
108477339
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108477339
Enzymes [BR:
gab01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
108477339
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
Transketolase_C_1
PFOR_II
Motif
Other DBs
NCBI-GeneID:
108477339
NCBI-ProteinID:
XP_017635338
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All DBs
Position
12:55412163..55415387
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AA seq
707 aa
AA seq
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MAVSASFLPPLPCLKPNLSSYKHLCPKACAGNFEGDEGCNKMRIRKENDGWKIDFSGKKP
ATPLLDTINYPLHMKNLSTRELEQLAAEVRADIVHTVSKTGGHLSSSLGVVELTIALHHV
FDTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTS
ISAGLGMAVARDLLKKKNNVISVIGDGAMTAGLAYEAMNNAGFLDSNLIVVLNDNKQVSL
PTATLQGPATPVGALTRALTKIQASAEFRKLREKAKGLTKQIGGQTHEIAAKVDEYARGM
ISASGSTLFEELGLYYIGPVDGHNIEDLVAMFEKVKAMPAPGPVLIHIVTEKGKGYPPAE
AAIDKMHGVVNFDMETGKQFKSKSSTLSYTQYFAESLIKEAEADDKIVAIHAAMGGGTGL
NFFHKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKL
PVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHTVATAAAIDDRPS
CFRFPRGNGLGVVIPHDYKGTPLEIGKGRIIMEGNRVAILGYGSIVQQCIEAANMLRSQN
IYITVADARFCKPLDRDLIKQLANEHEILITVEEGSIGGFGSHVSHFLSLTGILDGPLKL
RAMVLPDRYIDHGSPQDQIEEAGLSSRHISATVQSMLGRPKQAKQFK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctgcctctttccttcctcctcttccatgtctcaaacctaacctttcttcc
tacaaacatttgtgtcccaaagcctgtgctggaaactttgaaggcgatgagggttgtaat
aaaatgaggataaggaaagaaaacgatggctggaagatcgatttctctgggaagaaaccg
gcaacgccattgttggacaccatcaattaccctcttcatatgaagaacttatcaacaagg
gaacttgaacaactggcggcagaagttagagctgatattgtgcacacagtatctaagacc
ggagggcatcttagctcaagcttaggtgtggtggagttgacaatagctttacaccatgta
ttcgacacacctgatgataaaattatatgggatgttgggcatcaggcataccctcataaa
atcctgacaggaagaaggtccaggatgcataccataagaaaaacttcaggccttgcaggg
tttcctaaaagggatgaaagtgtttatgatgcttttggtgctggacatagttccactagc
atatcagctggactcggtatggcagtggctagagaccttttgaagaagaaaaacaatgtg
atttcagtgattggagatggagctatgactgctggacttgcatatgaggctatgaataat
gcagggttccttgattcgaacttgatcgtcgtgttgaacgacaataaacaagtgtctcta
cctactgcaacactacaaggtcctgctactcctgttggagctcttactagggctttaacc
aagattcaagcaagcgccgagttccgaaaacttcgggagaaagcaaaaggcctaactaag
caaattgggggtcaaacacatgaaattgcagcaaaagtagatgagtatgcaagaggaatg
attagtgcttctggctccactctctttgaggaactaggcctatattatatcggtccggtt
gatggacacaatattgaagatttagtagctatgtttgagaaagtgaaagcgatgcctgcc
ccggggccggtcctaatccacattgtgacagagaaaggaaagggctatcccccagctgag
gcagcaattgataaaatgcatggtgttgtaaatttcgacatggaaacaggcaagcagttt
aagtccaagtcctctacactgtcgtatactcagtactttgctgagtcgctcatcaaagaa
gctgaggctgatgacaagattgtagccatccatgcagcaatgggtgggggaacaggtctc
aatttcttccataagaggttcccggaccgctgcttcgatgtggggattgctgagcaacac
gcagttacttttgcagctggtttagccaccgagggtctcaagccattctgtgctatctac
tcatcattcttgcaacggggatacgatcaggtggttcatgatgtggatcttcagaaatta
cctgtacggttcgcaatggatcgagctggtttggttggggcagatggacctacccactgt
ggtgcatttgacattacatacatggcttgcttgccaaacatggtggtaatggctccatcc
gatgaggccgagctcatgcatacggttgcaacagcagcagccatcgatgacagaccaagc
tgcttcagattccctagaggaaatggccttggagtggttatcccacatgattacaaagga
actccacttgagattgggaaaggaagaataattatggaaggcaacagagtagccatcctg
ggatatggttcaatagttcaacaatgcatagaagcagcaaacatgctgcgatcacaaaac
atatacataacagtagctgatgcaagattctgtaagcctctagacagggatctcatcaag
caattagcaaatgagcatgagattcttattactgtggaagagggttccattggaggtttt
ggctctcatgtatcacatttcttgagcttgactggtattttggatggacctctcaagttg
agagcaatggtgcttccagatagatacatagatcatggatcaccccaagaccagatagaa
gaagcagggctgtcttcaaggcatatctctgcaacagtccaatctatgctaggaaggcca
aaacaagccaagcagttcaagtag
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