Gossypium arboreum (tree cotton): 108477359
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Entry
108477359 CDS
T05776
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108477359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gab04040
]
108477359
Ion channels [BR:
gab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108477359
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Paralog
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
108477359
NCBI-ProteinID:
XP_017635364
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All DBs
Position
12:90955115..90961107
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AA seq
708 aa
AA seq
DB search
MTFRRDKFVRFKDWSSDDGSFTSKVRPSFSAVIEGARKLFENGSERVKGLKKPVNFGFSS
KKQPKKDKAVSSKKRTLNPQGDFLQNWNKMFLLSCAIALAIDPLFFYIPVVKGNLKCLDL
DNKLGVVASVLRTLIDAFYAIHIVFQFRTAFIAPSSRVFGRGELIEDSWAIAKRYLFKNF
FIDILAILPLPQLVVIIIKSSLKGSVSEITKDLLKTFIFIQYVPRILRIVPLFKEVTTTS
GILTKSAWTGAALNLFLYMLASHAVGAFWYLFSIERQDRCWRNAVNGDVAALYCHKSITR
NETLVNMLNTTCSLINPDDLKDPKHFNFGIFFDALESGVVETMDFPMKFLYCFWWALRNL
SSFGQNLKTSTYVWEILFAIAIAIGGLILFSLLIGNMQKYLESTGVRVEEMRVKRQDAEQ
WMSHRMLPENLRERIRRYEQYKWQETRGVEEEALIANLPRDLRRDIKRHLCLDLLKRVPM
FDKMDEQLLDAMCDRLKPVLYTDKSYILREGDPVEEMLFIIRGNLTSTTTNGGRTGFFNS
AHLKAGDFCGDDLLTWALDPQSSSNLPISTRTVQALKEVEAFALKADDLKFVASQFRRLS
SKQFMHTFKFYSVRWQTWAASFIQAAWRRHCRRKQVKSLREAEGEPLAALANGNETSPSL
GATLYASKFAVNALRTLRSHGSQSSPRLPQRLSPLLPQKPAEPDFTAE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgactttccggcgagacaaatttgtaagattcaaagattggagctcagatgatggatcg
tttacatcaaaagttagaccatcattcagtgctgttatagagggtgcccggaaactgttc
gagaatggttccgaacgagttaaaggcttaaagaaaccagtgaatttcgggttttcgagt
aaaaaacaaccgaagaaagacaaggcagtgagttcaaagaagaggactcttaatccacaa
ggagactttcttcaaaactggaacaaaatgttccttctttcatgtgccattgctctagct
attgatcctttgttcttttacatccctgtggttaagggaaatttgaaatgcctcgacttg
gacaacaaactcggagtcgttgctagtgtccttcgtactttaatcgacgctttttacgcc
attcatatcgtgtttcaattccgtaccgcattcattgccccgtcgtcgcgtgtattcggt
agaggcgagttgattgaagattcttgggctatcgcgaaacggtatttgttcaagaacttc
ttcattgatattctcgctatcttaccacttccacagctggtggtcataattataaaatca
tcattgaaaggctcggtttcggagatcacgaaagatttgttgaaaacctttattttcatc
caatacgtgccgagaatccttcgaatcgttcctcttttcaaagaagttacaaccacttcc
ggcatattaaccaaatcggcatggaccggtgctgctttgaatctcttcctatacatgtta
gctagtcatgcagttggagccttttggtacttgttttcgatcgaacgacaggaccggtgt
tggcgtaatgctgtaaatggcgacgtagccgcgttgtactgtcataaaagcataacacgt
aacgagacattagtgaatatgctgaatactacctgctcattaatcaatcccgacgacttg
aaagatccgaaacacttcaacttcgggatatttttcgatgcactcgagtccggtgtggtg
gaaaccatggattttcctatgaagttcttgtactgcttttggtgggctttgcgtaatcta
agttcttttggccaaaatctcaaaacaagtacctatgtgtgggagatattgtttgccatt
gccattgccattggtggcttgattctgttttcactgctcattgggaacatgcagaaatat
ctagaatcaacaggggtgagagtggaggaaatgagggtgaaaaggcaagatgcagagcaa
tggatgtcacaccggatgctaccggagaaccttagggaacgtataaggcgatatgaacag
tacaaatggcaagaaaccagaggtgttgaagaagaagccctcattgctaatcttcctagg
gatctcagaagagatataaagagacatctttgcttggatcttctcaaaagagtgccaatg
ttcgacaaaatggatgaacaactattagatgcaatgtgtgatcgtctcaaaccagtgctt
tacaccgacaaaagctatattctccgagaaggtgatcctgtggaggagatgctgtttatt
atccgagggaatctgacaagtacgaccacaaacggcggaagaaccggtttcttcaactct
gctcatctcaaagccggtgatttttgcggtgacgatctgctcacatgggcattggatccc
caatcatcgtcgaacctaccgatctcgacgagaacagtgcaggccttgaaagaagttgaa
gcttttgctttaaaggcggacgatttgaaattcgtggcttctcagtttcgacgtcttagc
agcaagcaattcatgcatactttcaagttctactcggtgagatggcagacatgggcggcg
tcgtttatacaagcagcttggcgccgacactgcaggaggaagcaggtaaagtcactacgt
gaagccgagggagagccgcttgcagctctggcaaacgggaacgaaacctcaccaagcctc
ggcgccacgctttacgcttcaaaatttgccgtcaatgcgttacgaacgttgcggagccat
ggctcgcaaagcagccctagattgcctcaaagattgtcgccgttgcttcctcaaaagcca
gccgagcctgattttacggctgaataa
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