Gossypium arboreum (tree cotton): 108477386
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Entry
108477386 CDS
T05776
Name
(RefSeq) homeobox-leucine zipper protein HDG11-like
KO
K09338
homeobox-leucine zipper protein
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108477386
Transcription factors [BR:
gab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
108477386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
DNA_gyraseB
CDT1_C
Motif
Other DBs
NCBI-GeneID:
108477386
NCBI-ProteinID:
XP_017635401
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All DBs
Position
12:119543904..119551948
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AA seq
713 aa
AA seq
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MDCGSGGGGLGASGSGGDHDSSDLSRRKKPYHRHTAHQIQRLESMFKECPHPDEKQRLQL
SRELGLAPRQIKFWFQNRRTQMKAQHERADNSALRAENDKIRCENIAIREALKNVICPSC
GGPPANEDSYFDDQKMRMENAQLKEELDRVSSIAAKYIGRPISQLPPVQPVHISSLDFRM
ASFDGYGVGAGPSLDLDLLPGSSSSMPNLPFQPVVISDMDKSLMSDIAANAMEELLRLLQ
TNEPLWIKSTNDGKDALNLESYERIFPKPNNTHFKSPNIRVEASRDSGVVIMNGLALVDM
FMDSNKWLELFPTIVSIAKTIEVISPGMLGTHSGSLQLMYEELQVLSPLVPTREFYTLRY
CQQIEQGLWAIVNVSYDLPQFASQCRSHRLPSGCLIQDMPNGYSKVTWLEHVEIEDKTPI
HRLYRDLVHSGSAFGAERWLTTLQRMCERFACLMVSSTSTRDLGGVIPSPDGKRSIMKLA
QRMVNNFCTSVGTSNSHRSTTLSGSNEIGVRVTVHKSSDPGQPNGIVLSAATTFWLPVSP
QNVFSFFKDERTRPQWDVLSNGNAVQEVAHIANGSHPGNCISVLRAFNTSHNNMLILQES
CIDSSGSLVVYCPVDLPAINVAMSGEDPSYIPLLPSGFTITPDGHLEQGDGASTSSSTGH
GRSSGGSLITVAFQILVSSLPSAKLNLDSVTTVNNLIGTTVQQIKAALNCPSS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggattgcggaagcggcggcggcggcttaggagcgagtggttccggcggagaccatgat
tcctccgacctttcacgacggaaaaagccttaccatcgtcacacagctcaccagattcag
aggcttgaatcgatgttcaaggaatgtccacacccagacgagaaacaaaggttacagcta
agtagggaattgggattagcaccaagacagatcaagttttggtttcaaaataggaggaca
caaatgaaggcacaacatgaaagagccgataactctgcacttcgtgctgagaacgataag
atccgatgtgaaaacatagccataagagaagcacttaagaatgtgatttgtccttcttgt
ggtggtcctcctgctaatgaagattcttattttgatgaccagaaaatgagaatggagaat
gctcaattaaaggaagagcttgatagagtatccagcattgcagccaagtacatagggaga
ccaatatcccaactcccaccagtacaacctgttcatatctcttcattagatttcaggatg
gcgagttttgacggctatggtgtcggcgctggtccttcactcgatctcgatctcctcccc
ggaagttcgtcatcaatgccgaatttaccgttccaaccggtcgttatttcagacatggac
aagtccctcatgtctgatatagccgcaaatgcaatggaagaactgcttaggctattacaa
accaatgaaccattgtggattaaatccactaatgatggcaaagatgctcttaatctcgaa
agttatgaaagaatcttccctaagcctaataatactcattttaaatctcctaatattagg
gtcgaagcttctcgagattccggtgttgttattatgaatggcttagctttggttgacatg
ttcatggattccaacaaatggttggagctatttcccaccattgtgtcaattgccaaaaca
atcgaagtgatttcacctgggatgttgggtacacatagtggttctttgcaattgatgtat
gaagaactacaggtcttgtctccattagtaccaacacgtgaattttatacacttcgatat
tgtcaacaaattgaacaagggttatgggctattgtcaatgtttcatatgatttgccacaa
tttgcttctcaatgtcgatctcatagactcccttctggttgtttgattcaagacatgcct
aatggttactccaaggttacttggttagaacatgtggagattgaagacaaaactccgatt
catcgattgtatcgagaccttgttcatagtggttcagcatttggagccgaacggtggctc
acgacccttcaaaggatgtgcgaacggtttgcttgcttaatggtatcaagcacttcgact
cgggatctcggtggagtgattccatctcccgatggcaagagaagcataatgaagctagct
caaaggatggtaaacaatttctgcacgagcgtcggcacgtcgaatagtcatcggtcgaca
acactttccggttcgaatgaaattggtgttcgggtcaccgttcataagagttctgatccc
ggacaacccaacggtatagttcttagtgcagctactacattttggctccctgttagtcca
caaaatgtcttcagtttcttcaaagatgaaagaactagaccacagtgggatgttctatcc
aacggcaacgcagtccaagaagttgctcatatcgcaaacggatcacatcccggcaactgt
atatccgttttacgagcctttaatacaagtcacaacaacatgttaatactacaagagagt
tgcattgacagttctggttcactggtggtatactgtccagttgatttaccagctattaat
gtagcaatgagcggcgaagatccatcttacattccgttacttccgtcaggttttacgata
acacccgacggtcatctcgagcaaggtgacggagcatcgacgagttctagtactgggcac
ggaagatcgtccggtggttcattgattacggtagcgtttcaaatactagtgagcagcttg
ccatcggcaaaattaaacttggattcggtcacaactgttaataaccttattggtactact
gtacaacaaattaaggctgctttgaattgtcctagttcttga
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