Gossypium arboreum (tree cotton): 108478186
Help
Entry
108478186 CDS
T05776
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108478186
Transcription machinery [BR:
gab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
108478186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
DUF6697
Motif
Other DBs
NCBI-GeneID:
108478186
NCBI-ProteinID:
XP_017636101
UniProt:
A0A0B0NEZ8
LinkDB
All DBs
Position
12:complement(117664754..117668094)
Genome browser
AA seq
516 aa
AA seq
DB search
MGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIMAFKADKSNNTALVTLRDHNLLPVETA
KEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQTFDEKGSE
GETKGRHLRRKRSTESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSGQ
SKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMKALLEA
KENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFQD
FANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG
LESVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVASLHLRHSVTQ
EEFISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
SGNLNISREMVRKHEVKALMKLKHPARVDYLRRYVV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtcagtgtttctagttcagctgcccgaactccagtaggattaggcacaaag
ttttctactcaaagatgtacatttagaagaccttgtattatggcatttaaagcagacaaa
tctaataatacggctctagttacgcttcgagaccataatcttttgccggtggaaacggct
aaggagcacccgaagagacgcgggaaagcgaaaaaggcttccaagactgtaaaccgtgac
tttactgatgaaggttctccgtacaccgtggacgtagattacaacgaagccgctgccaaa
ctcgaaaacatttataagcttagcccttcgactcaaacatttgatgaaaaagggagtgaa
ggtgagacaaaaggacgccatctgaggaggaagagatctacagaaagtgatgggaaagcg
gataacggtgatgataagatcgtggttcggagccagactaagaagaatagaagattgggc
cttgataaaaggattgaactgaaaaagaatagagaagaaaagtcagttgtttctggccag
agtaaaaagggtatctcgaatgaaagtgagaagatcgataggcttgtccgggactattcg
gcttcaaccgatttggtcagcctggactggaagaaaatgaagatacctccggttctgccg
tccaccgaacatacttggttgtttaagctaatgcagccaatgaaggcactgcttgaggca
aaagagaacttgcaaaaggatctgggtagagatcctactgaagatgaattagctgaggca
acaaattcgagtgcagctcaagtgagaagacagttagaggttggtcgagctgctagaaat
aagctcattaagcacaacctccggctcgttttgtttgtgataaacaaatattttcaagat
tttgcaaatggtccaagatttcaagacctttgtcaggctggagttaaaggacttatcaca
gccatcgaccgctttgaaccaagaaggagattccgtctttctacgtacggccttttttgg
attaggcatgcaattatacgttccatgaccctatcaagcttcacgcgtgtctcatttgga
cttgaatcagttagagtagaaatccaaagagccaaactggaattattgtttgaacttcat
agagaaccgacagacgatgaagtaatcaaaagagttgggatttcccccgagaggtaccaa
gaagtaatgagggcctcgaaacccgttgcatctcttcatttgaggcattccgtcacacaa
gaagagttcattagtggaatcaccgatgtcgatggtgttggaggcgatcaccgaaggcaa
cctgctcttctcaggcttgcacttgatgatgtgctcgattctctgaagccaaaagagagc
ctggtaatcaggcagagatacggactcgacggtaaaggtgatagaacattaggagaaatt
tctgggaacttaaacatttcgagagaaatggtccgaaagcacgaagtaaaggcacttatg
aagctcaagcatccagcccgagttgattatctccgccgatacgtcgtctga
DBGET
integrated database retrieval system
